RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB14275", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJDB14275 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29148664 29148664 PRJDB14275_P_NODE_4289_length_258_cov_2.863014_g4230_i0 PRJDB14275 4289 258 2.863014 7.38657612 Mycoplasmopsis arginini 2094 Bacteria Bacteria 72 1.81e-14   NR WP_282459951.1 2094 g4230 i0 100 0.395348837209302 34 0 39.5 0 232 131 39 72 WP_282459951.1 hypothetical protein, partial [Mycoplasmopsis arginini] diamond 102 72 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis arginini
32403661 32403661 PRJDB14275_P_NODE_5479_length_207_cov_0.976190_g5420_i0 PRJDB14275 5479 207 0.97619 2.0207133 Candidatus Pelethenecus sp. 3022886 Bacteria Bacteria 44.7 6.02e-4   NR HRF70007.1 3022886 g5420 i0 39.2 0.739130434782609 51 31 73.9 0 182 30 20 70 HRF70007.1 hypothetical protein [Candidatus Pelethenecus sp.] diamond 153 44.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes     Candidatus Pelethenecus Candidatus Pelethenecus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;