RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB14275" and tax_clade = "CRESS viruses"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • CRESS viruses · 2 ✖

bioproject 1

  • PRJDB14275 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18832835 18832835 PRJDB14275_P_NODE_4775_length_235_cov_1.346939_g4716_i0 PRJDB14275 4775 235 1.346939 3.1653066500000002 Viruses 10239 Viruses Viruses 399 6.529999999999999e-107   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g4716 i0 100 2.75744680851064 216 0 92 0 1 216 2415 2200 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 648 399 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus
23933517 23933517 PRJDB14275_P_NODE_4199_length_263_cov_2.183036_g4140_i0 PRJDB14275 4199 263 2.183036 5.74138468 Viruses 10239 Viruses Viruses 451 2.03e-122   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g4140 i0 99.595 2.82889733840304 247 1 94 0 1 247 85 331 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 744 451 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;