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contig_metadata

33 rows where bioproject = "PRJDB14274" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 33 ✖

tax_clade 1

bioproject 1

  • PRJDB14274 · 33 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1282832 1282832 PRJDB14274_S_NODE_9322_length_209_cov_0.878378_g9244_i0 PRJDB14274 9322 209 0.878378 1.83581002 archaeon 1906665 Archaea Archaea 118 2.79e-29   NR RYG65186.1 1906665 g9244 i0 85.5 0.990430622009569 69 10 99 0 1 207 286 354 RYG65186.1 MAG: hypothetical protein EON64_12455 [archaeon] diamond 207 118 1 Archaea               archaeon
3531592 3531592 PRJDB14274_S_NODE_4063_length_305_cov_2.684426_g3985_i0 PRJDB14274 4063 305 2.684426 8.1874993 archaeon 1906665 Archaea Archaea 188 4.55e-57   NR RYH04926.1 1906665 g3985 i0 90.1 0.99344262295082 101 10 99.3 0 1 303 70 170 RYH04926.1 MAG: 50S ribosomal protein L10, partial [archaeon] diamond 303 188 1 Archaea               archaeon
5110957 5110957 PRJDB14274_S_NODE_1645_length_475_cov_2.707729_g1567_i0 PRJDB14274 1645 475 2.707729 12.86171275 archaeon 1906665 Archaea Archaea 202 3.3e-64   NR RYH05217.1 1906665 g1567 i0 88.1 0.688421052631579 109 13 68.8 0 474 148 25 133 RYH05217.1 MAG: 50S ribosomal protein L15 [archaeon] diamond 327 202 1 Archaea               archaeon
7660859 7660859 PRJDB14274_S_NODE_5267_length_272_cov_1.739336_g5189_i0 PRJDB14274 5267 272 1.739336 4.73099392 archaeon 1906665 Archaea Archaea 169 2.26e-50   NR RYG64625.1 1906665 g5189 i0 86.7 0.992647058823529 90 12 99.3 0 1 270 169 258 RYG64625.1 MAG: 50S ribosomal protein L3, partial [archaeon] diamond 270 169 1 Archaea               archaeon
13734450 13734450 PRJDB14274_S_NODE_7151_length_237_cov_1.170455_g7073_i0 PRJDB14274 7151 237 1.170455 2.77397835 archaeon 1906665 Archaea Archaea 135 1.26e-36   NR RYH04926.1 1906665 g7073 i0 84.6 0.987341772151899 78 12 98.7 0 3 236 161 238 RYH04926.1 MAG: 50S ribosomal protein L10, partial [archaeon] diamond 234 135 1 Archaea               archaeon
14036592 14036592 PRJDB14274_S_NODE_1252_length_538_cov_2.389937_g1176_i0 PRJDB14274 1252 538 2.389937 12.85786106 archaeon 1906665 Archaea Archaea 276 1.22e-90   NR RYG64625.1 1906665 g1176 i0 78.5 0.986988847583643 177 38 98.7 0 531 1 1 177 RYG64625.1 MAG: 50S ribosomal protein L3, partial [archaeon] diamond 531 276 1 Archaea               archaeon
14036593 14036593 PRJDB14274_S_NODE_1272_length_536_cov_2.046316_g1196_i0 PRJDB14274 1272 536 2.046316 10.96825376 archaeon 1906665 Archaea Archaea 259 3.77e-86   NR RYH30694.1 1906665 g1196 i0 86.1 3.38059701492537 151 21 84.5 0 513 61 1 151 RYH30694.1 MAG: 30S ribosomal protein S15 [archaeon] diamond 1812 259 1 Archaea               archaeon
14036623 14036623 PRJDB14274_S_NODE_812_length_657_cov_32.563758_g740_i0 PRJDB14274 812 657 32.563758 213.94389006 Thermoplasmatales archaeon 2268204 Archaea Archaea 63.9 3.02e-5   NTclustered gi|2573961727|gb|CP133596.1| 2268204 g740 i0 100 0.0974124809741248 34 0 5 0 599 632 518155 518122 MAG: Thermoplasmatales archaeon isolate BR_05 chromosome, complete genome blastn 64 63.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
17860376 17860376 PRJDB14274_S_NODE_1635_length_476_cov_4.216867_g1557_i0 PRJDB14274 1635 476 4.216867 20.07228692 archaeon 1906665 Archaea Archaea 226 3.3699999999999995e-72   NR RYH25290.1 1906665 g1557 i0 93.2 0.743697478991597 118 8 74.4 0 3 356 89 206 RYH25290.1 MAG: 50S ribosomal protein L16 [archaeon] diamond 354 226 1 Archaea               archaeon
26684070 26684070 PRJDB14274_S_NODE_1861_length_445_cov_7.169271_g1783_i0 PRJDB14274 1861 445 7.169271 31.90325595 archaeon 1906665 Archaea Archaea 113 2.05e-29   NR RYH00022.1 1906665 g1783 i0 67.7 0.667415730337079 99 31 66.7 1 355 59 1 98 RYH00022.1 MAG: hypothetical protein EON65_49750 [archaeon] diamond 297 113 1 Archaea               archaeon
27000565 27000565 PRJDB14274_S_NODE_4602_length_289_cov_1.228070_g4524_i0 PRJDB14274 4602 289 1.22807 3.5491223 archaeon 1906665 Archaea Archaea 91.7 6.09e-22   NR RYH17538.1 1906665 g4524 i0 68.6 0.726643598615917 70 21 72.7 1 44 253 1 69 RYH17538.1 MAG: hypothetical protein EON65_28465 [archaeon] diamond 210 91.7 1 Archaea               archaeon
27063995 27063995 PRJDB14274_S_NODE_7602_length_230_cov_1.136095_g7524_i0 PRJDB14274 7602 230 1.136095 2.6130185 archaeon 1906665 Archaea Archaea 117 2.63e-32   NR RYG60404.1 1906665 g7524 i0 77.5 2.77826086956522 71 16 92.6 0 1 213 14 84 RYG60404.1 MAG: hypothetical protein EON64_19315, partial [archaeon] diamond 639 117 1 Archaea               archaeon
27063998 27063998 PRJDB14274_S_NODE_8362_length_219_cov_2.126582_g8284_i0 PRJDB14274 8362 219 2.126582 4.65721458 archaeon 1906665 Archaea Archaea 62 6.51e-10   NR RYG68310.1 1906665 g8284 i0 60.9 0.945205479452055 69 21 90.4 5 1 198 88 153 RYG68310.1 MAG: hypothetical protein EON64_05455 [archaeon] diamond 207 62 1 Archaea               archaeon
27126799 27126799 PRJDB14274_S_NODE_5362_length_270_cov_1.244019_g5284_i0 PRJDB14274 5362 270 1.244019 3.3588513 uncultured archaeon 115547 Archaea Archaea 43.5 0.0122   NR QBM02692.1 115547 g5284 i0 35.7 0.622222222222222 56 36 62.2 0 237 70 45 100 QBM02692.1 hypothetical protein [uncultured archaeon] diamond 168 43.5 1 Archaea               uncultured archaeon
27253561 27253561 PRJDB14274_S_NODE_9623_length_206_cov_3.282759_g9545_i0 PRJDB14274 9623 206 3.282759 6.76248354 archaeon 1906665 Archaea Archaea 133 4.1e-38   NR RYG68310.1 1906665 g9545 i0 91.2 0.990291262135922 68 6 99 0 206 3 5 72 RYG68310.1 MAG: hypothetical protein EON64_05455 [archaeon] diamond 204 133 1 Archaea               archaeon
27696170 27696170 PRJDB14274_S_NODE_2704_length_373_cov_1.301282_g2626_i0 PRJDB14274 2704 373 1.301282 4.85378186 archaeon 1906665 Archaea Archaea 103 1.3899999999999998e-23   NR RYH20254.1 1906665 g2626 i0 51.5 0.828418230563003 103 50 82.8 0 367 59 247 349 RYH20254.1 MAG: hypothetical protein EON65_24020 [archaeon] diamond 309 103 1 Archaea               archaeon
27696181 27696181 PRJDB14274_S_NODE_6644_length_245_cov_1.559783_g6566_i0 PRJDB14274 6644 245 1.559783 3.82146835 archaeon 1906665 Archaea Archaea 111 8.800000000000001e-30   NR RYH18874.1 1906665 g6566 i0 67.9 0.955102040816327 78 23 95.5 1 4 237 27 102 RYH18874.1 MAG: hypothetical protein EON65_26765 [archaeon] diamond 234 111 1 Archaea               archaeon
27948455 27948455 PRJDB14274_S_NODE_3565_length_325_cov_1.518939_g3487_i0 PRJDB14274 3565 325 1.518939 4.93655175 archaeon 1906665 Archaea Archaea 153 1.7199999999999998e-45   NR RYG63904.1 1906665 g3487 i0 87.6 0.821538461538462 89 11 82.2 0 322 56 40 128 RYG63904.1 MAG: hypothetical protein EON64_15030 [archaeon] diamond 267 153 1 Archaea               archaeon
27980031 27980031 PRJDB14274_S_NODE_1665_length_472_cov_2.576642_g1587_i0 PRJDB14274 1665 472 2.576642 12.16175024 archaeon 1906665 Archaea Archaea 121 3.0199999999999997e-32   NR RYH28340.1 1906665 g1587 i0 67.5 0.76271186440678 120 35 76.3 1 458 99 1 116 RYH28340.1 MAG: 50S ribosomal protein P1 [archaeon] diamond 360 121 1 Archaea               archaeon
28068810 28068810 PRJDB14274_S_NODE_2225_length_410_cov_2.068768_g2147_i0 PRJDB14274 2225 410 2.068768 8.4819488 root 1 Root_unresolved Root_unresolved 151 4.0799999999999996e-43   NR RYG58925.1 1906665 g2147 i0 80.5 2.5390243902439 87 17 63.7 0 409 149 137 223 RYG58925.1 MAG: 30S ribosomal protein S2, partial [archaeon] diamond 1041 151 1 Archaea               archaeon
28264002 28264002 PRJDB14274_S_NODE_3186_length_343_cov_1.326241_g3108_i0 PRJDB14274 3186 343 1.326241 4.54900663 archaeon 1906665 Archaea Archaea 176 6.58e-50   NR RYG65186.1 1906665 g3108 i0 81.1 0.927113702623907 106 19 92.7 1 3 320 429 533 RYG65186.1 MAG: hypothetical protein EON64_12455 [archaeon] diamond 318 176 1 Archaea               archaeon
28358764 28358764 PRJDB14274_S_NODE_7786_length_227_cov_2.234940_g7708_i0 PRJDB14274 7786 227 2.23494 5.0733138 archaeon 1906665 Archaea Archaea 107 1.6600000000000002e-26   NR RYH18875.1 1906665 g7708 i0 72 0.991189427312775 75 21 99.1 0 1 225 115 189 RYH18875.1 MAG: hypothetical protein EON65_26770 [archaeon] diamond 225 107 1 Archaea               archaeon
28422230 28422230 PRJDB14274_S_NODE_5526_length_266_cov_1.385366_g5448_i0 PRJDB14274 5526 266 1.385366 3.68507356 archaeon 1906665 Archaea Archaea 77.8 1.43e-15   NR RYG67202.1 1906665 g5448 i0 44.9 2.80827067669173 89 47 99.2 2 264 1 33 120 RYG67202.1 MAG: hypothetical protein EON64_07960 [archaeon] diamond 747 77.8 1 Archaea               archaeon
28800740 28800740 PRJDB14274_S_NODE_1808_length_451_cov_1.984615_g1730_i0 PRJDB14274 1808 451 1.984615 8.95061365 archaeon 1906665 Archaea Archaea 145 3.5e-41   NR RYG68742.1 1906665 g1730 i0 76.8 0.658536585365854 99 23 65.9 0 449 153 62 160 RYG68742.1 MAG: hypothetical protein EON64_04505 [archaeon] diamond 297 145 1 Archaea               archaeon
29684691 29684691 PRJDB14274_S_NODE_9870_length_205_cov_0.902778_g9792_i0 PRJDB14274 9870 205 0.902778 1.8506949 archaeon 1906665 Archaea Archaea 107 2.64e-25   NR RYH13809.1 1906665 g9792 i0 74.6 0.980487804878049 67 17 98 0 5 205 206 272 RYH13809.1 MAG: VWA domain-containing protein [archaeon] diamond 201 107 1 Archaea               archaeon
30380376 30380376 PRJDB14274_S_NODE_9693_length_206_cov_1.234483_g9615_i0 PRJDB14274 9693 206 1.234483 2.54303498 archaeon 1906665 Archaea Archaea 64.3 5.18e-10   NR RYH20254.1 1906665 g9615 i0 52.6 0.830097087378641 57 27 83 0 173 3 1 57 RYH20254.1 MAG: hypothetical protein EON65_24020 [archaeon] diamond 171 64.3 1 Archaea               archaeon
30443305 30443305 PRJDB14274_S_NODE_8853_length_213_cov_1.559211_g8775_i0 PRJDB14274 8853 213 1.559211 3.32111943 Methanobacterium formicicum 2162 Archaea Archaea 42.7 0.0259   NR WP_048085055.1 2162 g8775 i0 41.9 0.605633802816901 43 25 60.6 0 162 34 145 187 WP_048085055.1 ABC-ATPase domain-containing protein [Methanobacterium formicicum] diamond 129 42.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium formicicum
30601011 30601011 PRJDB14274_S_NODE_4353_length_296_cov_1.378723_g4275_i0 PRJDB14274 4353 296 1.378723 4.08102008 archaeon 1906665 Archaea Archaea 134 9.42e-37   NR RYH18875.1 1906665 g4275 i0 72.4 0.993243243243243 98 25 99.3 1 3 296 108 203 RYH18875.1 MAG: hypothetical protein EON65_26770 [archaeon] diamond 294 134 1 Archaea               archaeon
30790687 30790687 PRJDB14274_S_NODE_7654_length_229_cov_1.547619_g7576_i0 PRJDB14274 7654 229 1.547619 3.54404751 archaeon 1906665 Archaea Archaea 83.6 6.77e-19   NR RYG96209.1 1906665 g7576 i0 67.3 0.720524017467249 55 18 72.1 0 229 65 43 97 RYG96209.1 MAG: hypothetical protein EON65_54770, partial [archaeon] diamond 165 83.6 1 Archaea               archaeon
31075152 31075152 PRJDB14274_S_NODE_7515_length_231_cov_1.370588_g7437_i0 PRJDB14274 7515 231 1.370588 3.16605828 Archaeoglobaceae archaeon 2511821 Archaea Archaea 42.7 0.0298   NR HID42582.1 2511821 g7437 i0 32.8 0.87012987012987 67 44 85.7 1 32 229 103 169 HID42582.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 201 42.7 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
31581140 31581140 PRJDB14274_S_NODE_8496_length_218_cov_0.891720_g8418_i0 PRJDB14274 8496 218 0.89172 1.9439496 Nitrosarchaeum sp. 2026886 Archaea Archaea 104 3.96e-24   NR MFB5612793.1 2026886 g8418 i0 81.8 1.85779816513761 66 12 90.8 0 218 21 505 570 MFB5612793.1 molecular chaperone DnaK [Nitrosarchaeum sp.] diamond 405 104 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
31802222 31802222 PRJDB14274_S_NODE_6697_length_244_cov_2.000000_g6619_i0 PRJDB14274 6697 244 2 4.88 archaeon 1906665 Archaea Archaea 141 1.27e-41   NR RYH06909.1 1906665 g6619 i0 84.6 0.959016393442623 78 12 95.9 0 236 3 1 78 RYH06909.1 MAG: hypothetical protein EON65_42315 [archaeon] diamond 234 141 1 Archaea               archaeon
32023943 32023943 PRJDB14274_S_NODE_3538_length_326_cov_1.422642_g3460_i0 PRJDB14274 3538 326 1.422642 4.63781292 archaeon 1906665 Archaea Archaea 181 2.24e-56   NR RYH28872.1 1906665 g3460 i0 87.9 0.911042944785276 99 12 91.1 0 27 323 4 102 RYH28872.1 MAG: hypothetical protein EON65_10545 [archaeon] diamond 297 181 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;