RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where bioproject = "PRJDB14274" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB14274 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
980948 980948 PRJDB14274_S_NODE_9421_length_208_cov_0.884354_g9343_i0 PRJDB14274 9421 208 0.884354 1.83945632 Metazoa 33208 Platyhelminthes Platyhelminthes 62.1 3.03e-5   NTclustered gi|690882270|emb|LN386135.1| 99802 g9343 i0 97.222 3.87019230769231 36 1 17 0 156 191 554 519 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0238388 blastn 805 62.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
7660857 7660857 PRJDB14274_S_NODE_47_length_1953_cov_6.556554_g40_i0 PRJDB14274 47 1953 6.556554 128.04949962 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 393 5.3599999999999985e-121   NR CDS31835.1 85433 g40 i0 40.3 5 491 247 68.8 8 55 1398 338 825 CDS31835.1 Papilin [Hymenolepis microstoma] diamond 9765 393 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
7660862 7660862 PRJDB14274_S_NODE_567_length_783_cov_5.333795_g511_i0 PRJDB14274 567 783 5.333795 41.76361485 Metazoa 33208 Platyhelminthes Platyhelminthes 449 2.09e-154   NR CDS16437.1 6210 g511 i0 82.1 456.578544061303 257 46 98.5 0 772 2 58 314 CDS16437.1 tubulin alpha chain [Echinococcus granulosus] diamond 357501 453 0.991169977924945 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
11486470 11486470 PRJDB14274_S_NODE_6830_length_242_cov_1.381215_g6752_i0 PRJDB14274 6830 242 1.381215 3.3425403 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|687163270|emb|LN038880.1| 99802 g6752 i0 100 0.115702479338843 28 0 12 0 106 133 741 768 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0037985 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
17558864 17558864 PRJDB14274_S_NODE_10654_length_174_cov_6.522124_g10576_i0 PRJDB14274 10654 174 6.522124 11.34849576 Metazoa 33208 Platyhelminthes Platyhelminthes 198 1.78e-46   NTclustered gi|684409700|ref|XM_009177569.1| 6198 g10576 i0 87.647 99.2701149425287 170 21 98 0 3 172 205 374 Opisthorchis viverrini hypothetical protein partial mRNA blastn 17273 200 0.99 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
20409178 20409178 PRJDB14274_S_NODE_617_length_750_cov_5.722787_g557_i0 PRJDB14274 617 750 5.722787 42.9209025 Metazoa 33208 Platyhelminthes Platyhelminthes 450 2.3499999999999998e-157   NR CAX70940.1 6182 g557 i0 96 174.064 224 9 89.6 0 672 1 1 224 CAX70940.1 putative tubulin, beta, 2 [Schistosoma japonicum] diamond 130548 452 0.995575221238938 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
28226443 28226443 PRJDB14274_S_NODE_5386_length_269_cov_1.846154_g5308_i0 PRJDB14274 5386 269 1.846154 4.96615426 Metazoa 33208 Platyhelminthes Platyhelminthes 58.5 1.3e-7   NR VDP45124.1 6186 g5308 i0 40.2 11.4981412639405 97 47 95.9 2 259 2 19 115 VDP45124.1 unnamed protein product [Schistosoma curassoni] diamond 3093 58.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma curassoni
28580020 28580020 PRJDB14274_S_NODE_8107_length_223_cov_1.203704_g8029_i0 PRJDB14274 8107 223 1.203704 2.68425992 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 44.3 0.00803   NR PAA79683.1 282301 g8029 i0 44.8 0.901345291479821 67 36 88.8 1 25 222 178 244 PAA79683.1 hypothetical protein BOX15_Mlig004819g2, partial [Macrostomum lignano] diamond 201 44.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28611519 28611519 PRJDB14274_S_NODE_10487_length_192_cov_2.458015_g10409_i0 PRJDB14274 10487 192 2.458015 4.7193888 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 88.6 8.47e-19   NR PAA66530.1 282301 g10409 i0 60.3 3.9375 63 25 98.4 0 190 2 177 239 PAA66530.1 hypothetical protein BOX15_Mlig030441g1 [Macrostomum lignano] diamond 756 88.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
29521233 29521233 PRJDB14274_S_NODE_5910_length_258_cov_1.329949_g5832_i0 PRJDB14274 5910 258 1.329949 3.43126842 Opisthorchiidae 6196 Platyhelminthes Platyhelminthes 50.8 1.65e-5   NR OON18335.1 6198 g5832 i0 40.3 1.67441860465116 72 43 83.7 0 248 33 17 88 OON18335.1 hypothetical protein X801_05811 [Opisthorchis viverrini] diamond 432 50.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
29584112 29584112 PRJDB14274_S_NODE_7970_length_225_cov_1.189024_g7892_i0 PRJDB14274 7970 225 1.189024 2.675304 Metazoa 33208 Platyhelminthes Platyhelminthes 137 3.49e-36   NR CAH8612082.1 6185 g7892 i0 82.4 63.0266666666667 74 13 98.7 0 3 224 322 395 CAH8612082.1 unnamed protein product [Schistosoma haematobium] diamond 14181 138 0.992753623188406 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
29716286 29716286 PRJDB14274_S_NODE_3590_length_324_cov_1.231939_g3512_i0 PRJDB14274 3590 324 1.231939 3.99148236 Echinostoma caproni 27848 Platyhelminthes Platyhelminthes 48.9 3.99e-4   NR VDP69948.1 27848 g3512 i0 68.8 0.296296296296296 32 10 29.6 0 97 2 29 60 VDP69948.1 unnamed protein product [Echinostoma caproni] diamond 96 48.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Echinostomatidae Echinostoma Echinostoma caproni
29937732 29937732 PRJDB14274_S_NODE_5671_length_263_cov_1.638614_g5593_i0 PRJDB14274 5671 263 1.638614 4.30955482 Calicophoron daubneyi 300641 Platyhelminthes Platyhelminthes 63.5 1.48e-10   NR CAL5138721.1 300641 g5593 i0 55.6 1.30038022813688 54 24 61.6 0 102 263 60 113 CAL5138721.1 unnamed protein product [Calicophoron daubneyi] diamond 342 63.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi
29995123 29995123 PRJDB14274_S_NODE_10111_length_203_cov_0.915493_g10033_i0 PRJDB14274 10111 203 0.915493 1.85845079 Schistosoma 6181 Platyhelminthes Platyhelminthes 48.1 2.77e-4   NR CAH8471395.1 6184 g10033 i0 37.5 6.38423645320197 72 35 91.6 1 187 2 420 491 CAH8471395.1 unnamed protein product [Schistosoma bovis] diamond 1296 48.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma bovis
30311404 30311404 PRJDB14274_S_NODE_5572_length_265_cov_1.485294_g5494_i0 PRJDB14274 5572 265 1.485294 3.9360291 Opisthokonta 33154 Platyhelminthes Platyhelminthes 105 1.17e-25   NR CAH8652332.1 39320 g5494 i0 54.9 21.9056603773585 82 37 92.8 0 264 19 168 249 CAH8652332.1 unnamed protein product [Heterobilharzia americana] diamond 5805 105 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Heterobilharzia Heterobilharzia americana
30601013 30601013 PRJDB14274_S_NODE_4633_length_288_cov_1.290749_g4555_i0 PRJDB14274 4633 288 1.290749 3.71735712 Rodentolepis nana 102285 Platyhelminthes Platyhelminthes 72.8 9.51e-13   NR VDO05413.1 102285 g4555 i0 49.3 1.40625 67 34 69.8 0 284 84 240 306 VDO05413.1 unnamed protein product [Rodentolepis nana] diamond 405 72.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Rodentolepis Rodentolepis nana
30974542 30974542 PRJDB14274_S_NODE_5074_length_277_cov_0.902778_g4996_i0 PRJDB14274 5074 277 0.902778 2.50069506 Metazoa 33208 Platyhelminthes Platyhelminthes 141 1.37e-36   NR THD26152.1 6192 g4996 i0 68.9 20.4259927797834 90 28 97.5 0 8 277 625 714 THD26152.1 Pre mRNA splicing factor SYF1 [Fasciola hepatica] diamond 5658 142 0.992957746478873 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
31232884 31232884 PRJDB14274_S_NODE_6755_length_243_cov_1.780220_g6677_i0 PRJDB14274 6755 243 1.78022 4.3259346 Trichobilharzia szidati 157070 Platyhelminthes Platyhelminthes 52.4 1.45e-5   NR CAH8856828.1 157070 g6677 i0 43.3 4.77777777777778 67 32 75.3 1 6 188 77 143 CAH8856828.1 unnamed protein product [Trichobilharzia szidati] diamond 1161 52.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia szidati

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;