contig_metadata
10 rows where bioproject = "PRJDB14274" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 980943 | 980943 | PRJDB14274_S_NODE_6481_length_248_cov_1.101604_g6403_i0 | PRJDB14274 | 6481 | 248 | 1.101604 | 2.73197792 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 178 | 3.5499999999999993e-40 | NTclustered | gi|59894163|gb|AY729864.1| | 74557 | g6403 | i0 | 79.918 | 27.5604838709677 | 244 | 47 | 98 | 2 | 6 | 248 | 958 | 1200 | Thraustotheca clavata heat shock protein 90 gene, partial cds | blastn | 6835 | 178 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata | ||
| 6386870 | 6386870 | PRJDB14274_S_NODE_8926_length_212_cov_1.483444_g8848_i0 | PRJDB14274 | 8926 | 212 | 1.483444 | 3.14490128 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 0.019 | NTclustered | gi|698803785|ref|XM_009836620.1| | 112090 | g8848 | i0 | 96.774 | 0.14622641509434 | 31 | 1 | 15 | 0 | 84 | 114 | 963 | 993 | Aphanomyces astaci hypothetical protein mRNA | blastn | 31 | 52.8 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 16585361 | 16585361 | PRJDB14274_S_NODE_1994_length_431_cov_2.789189_g1916_i0 | PRJDB14274 | 1994 | 431 | 2.789189 | 12.02140459 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 244 | 6.39e-60 | NTclustered | gi|698807229|ref|XM_009838342.1| | 112090 | g1916 | i0 | 80.119 | 66.0719257540603 | 337 | 59 | 77 | 4 | 102 | 431 | 441 | 106 | Aphanomyces astaci polyubiquitin mRNA | blastn | 28477 | 244 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 17860386 | 17860386 | PRJDB14274_S_NODE_3895_length_311_cov_1.332000_g3817_i0 | PRJDB14274 | 3895 | 311 | 1.332 | 4.14252 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 165 | 3.58e-36 | NTclustered | gi|2795048880|ref|XM_067943659.1| | 4785 | g3817 | i0 | 76.623 | 4.79742765273312 | 308 | 67 | 98 | 4 | 1 | 304 | 415 | 109 | Phytophthora cinnamomi Calmodulin (IUM83_18649), partial mRNA | blastn | 1492 | 165 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 20107487 | 20107487 | PRJDB14274_S_NODE_2736_length_370_cov_2.307443_g2658_i0 | PRJDB14274 | 2736 | 370 | 2.307443 | 8.5375391 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 215 | 4.24e-51 | NTclustered | gi|673019759|ref|XM_008865619.1| | 157072 | g2658 | i0 | 79.734 | 20.6486486486486 | 301 | 57 | 81 | 4 | 5 | 303 | 184 | 482 | Aphanomyces invadans 40S ribosomal protein S23 mRNA | blastn | 7640 | 217 | 0.990783410138249 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 28447930 | 28447930 | PRJDB14274_S_NODE_2226_length_410_cov_2.042980_g2148_i0 | PRJDB14274 | 2226 | 410 | 2.04298 | 8.376218 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 94.7 | 8.97e-22 | NR | KAE8911393.1 | 53985 | g2148 | i0 | 53.2 | 2.68536585365854 | 94 | 33 | 62.2 | 3 | 409 | 155 | 48 | 139 | KAE8911393.1 hypothetical protein PF003_g4481 [Phytophthora fragariae] | diamond | 1101 | 95.5 | 0.991623036649215 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora fragariae | ||
| 29237189 | 29237189 | PRJDB14274_S_NODE_1529_length_493_cov_2.893519_g1452_i0 | PRJDB14274 | 1529 | 493 | 2.893519 | 14.26504867 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 161 | 4.62e-43 | NR | XP_024573476.1 | 4781 | g1452 | i0 | 64.7 | 8.3184584178499 | 116 | 41 | 70.6 | 0 | 7 | 354 | 533 | 648 | XP_024573476.1 dead deah box helicase [Plasmopara halstedii] | diamond | 4101 | 162 | 0.993827160493827 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Plasmopara | Plasmopara halstedii | ||
| 32681604 | 32681604 | PRJDB14274_S_NODE_7020_length_239_cov_1.393258_g6942_i0 | PRJDB14274 | 7020 | 239 | 1.393258 | 3.32988662 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 45.1 | 7.97e-4 | NR | OQR86152.1 | 1202772 | g6942 | i0 | 61.3 | 0.803347280334728 | 31 | 12 | 38.9 | 0 | 15 | 107 | 55 | 85 | OQR86152.1 hypothetical protein ACHHYP_10924 [Achlya hypogyna] | diamond | 192 | 45.1 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Achlya | Achlya hypogyna | ||
| 32750736 | 32750736 | PRJDB14274_S_NODE_8780_length_214_cov_1.535948_g8702_i0 | PRJDB14274 | 8780 | 214 | 1.535948 | 3.28692872 | Phytophthora infestans T3 | 4787 | SAR_Eukaryotes | SAR_Eukaryotes | 115 | 6.1499999999999986e-28 | NR | XP_002997683.1 | 403677 | g8702 | i0 | 79.7 | 3.86915887850467 | 69 | 14 | 96.7 | 0 | 6 | 212 | 146 | 214 | XP_002997683.1 aconitate hydratase, mitochondrial precursor [Phytophthora infestans T30-4] | diamond | 828 | 115 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 32782025 | 32782025 | PRJDB14274_S_NODE_5920_length_258_cov_1.203046_g5842_i0 | PRJDB14274 | 5920 | 258 | 1.203046 | 3.10385868 | Thraustotheca clavata | 74557 | SAR_Eukaryotes | SAR_Eukaryotes | 75.1 | 5.91e-14 | NR | OQS02109.1 | 74557 | g5842 | i0 | 56.4 | 3.77906976744186 | 78 | 16 | 90.7 | 2 | 24 | 257 | 20 | 79 | OQS02109.1 60S ribosomal protein L7a-2 [Thraustotheca clavata] | diamond | 975 | 75.1 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;