contig_metadata
14 rows where bioproject = "PRJDB14274" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3834724 | 3834724 | PRJDB14274_S_NODE_3744_length_317_cov_2.246094_g3666_i0 | PRJDB14274 | 3744 | 317 | 2.246094 | 7.12011798 | Streptomyces sp. NBC_01003 | 2903714 | Bacteria | Bacteria | 52.8 | 0.03 | NTclustered | gi|2655201824|gb|CP108707.1| | 2903714 | g3666 | i0 | 100 | 0.0883280757097792 | 28 | 0 | 9 | 0 | 44 | 71 | 5629914 | 5629887 | Streptomyces sp. NBC_01003 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01003 | ||
| 4808883 | 4808883 | PRJDB14274_S_NODE_5244_length_273_cov_1.212264_g5166_i0 | PRJDB14274 | 5244 | 273 | 1.212264 | 3.30948072 | Bacteria | 2 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|54013472|dbj|AP006618.1| | 247156 | g5166 | i0 | 100 | 0.205128205128205 | 28 | 0 | 10 | 0 | 30 | 57 | 2431874 | 2431847 | Nocardia farcinica IFM 10152 DNA, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Nocardia | Nocardia farcinica | ||
| 5110969 | 5110969 | PRJDB14274_S_NODE_2845_length_363_cov_1.794702_g2767_i0 | PRJDB14274 | 2845 | 363 | 1.794702 | 6.51476826 | Humibacter ginsenosidimutans | 2599293 | Bacteria | Bacteria | 52.8 | 0.034 | NTclustered | gi|1719887840|gb|CP042305.1| | 2599293 | g2767 | i0 | 94.286 | 0.0964187327823691 | 35 | 0 | 9 | 2 | 302 | 335 | 2492700 | 2492667 | Humibacter ginsenosidimutans strain WJ7-1 chromosome, complete genome | blastn | 35 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Humibacter | Humibacter ginsenosidimutans | ||
| 8935524 | 8935524 | PRJDB14274_S_NODE_2728_length_371_cov_1.648387_g2650_i0 | PRJDB14274 | 2728 | 371 | 1.648387 | 6.11551577 | Actinacidiphila reveromycinica | 659352 | Bacteria | Bacteria | 52.8 | 0.035 | NTclustered | gi|1950600667|dbj|AP018365.1| | 659352 | g2650 | i0 | 100 | 0.0754716981132075 | 28 | 0 | 8 | 0 | 34 | 61 | 7904421 | 7904448 | Streptomyces sp. SN-593 DNA, nearly complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Actinacidiphila | Actinacidiphila reveromycinica | ||
| 8935550 | 8935550 | PRJDB14274_S_NODE_8468_length_218_cov_1.484076_g8390_i0 | PRJDB14274 | 8468 | 218 | 1.484076 | 3.23528568 | Alloscardovia omnicolens | 419015 | Bacteria | Bacteria | 372 | 1.3e-98 | NTclustered | gi|937376393|gb|KR351282.1| | 419015 | g8390 | i0 | 98.122 | 220.967889908257 | 213 | 4 | 98 | 0 | 1 | 213 | 1219 | 1007 | Alloscardovia omnicolens strain CCUG 31649T 23S ribosomal RNA gene, partial sequence | blastn | 48171 | 372 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Alloscardovia | Alloscardovia omnicolens | ||
| 12762084 | 12762084 | PRJDB14274_S_NODE_4371_length_296_cov_1.068085_g4293_i0 | PRJDB14274 | 4371 | 296 | 1.068085 | 3.1615316 | Miniimonas sp. S16 | 2171623 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|1384397111|gb|CP029049.1| | 2171623 | g4293 | i0 | 100 | 0.097972972972973 | 29 | 0 | 10 | 0 | 260 | 288 | 2318597 | 2318569 | Miniimonas sp. S16 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Beutenbergiaceae | Miniimonas | Miniimonas sp. S16 | ||
| 17860374 | 17860374 | PRJDB14274_S_NODE_1515_length_496_cov_1.328736_g1438_i0 | PRJDB14274 | 1515 | 496 | 1.328736 | 6.59053056 | Actinomyces faecalis | 2722820 | Bacteria | Bacteria | 52.8 | 0.048 | NTclustered | gi|1928816069|gb|CP063418.1| | 2722820 | g1438 | i0 | 100 | 0.0564516129032258 | 28 | 0 | 6 | 0 | 229 | 256 | 1693417 | 1693444 | Actinomyces faecalis strain ZJ34 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces faecalis | ||
| 20107493 | 20107493 | PRJDB14274_S_NODE_6916_length_241_cov_0.772222_g6838_i0 | PRJDB14274 | 6916 | 241 | 0.772222 | 1.86105502 | Corynebacterium | 1716 | Bacteria | Bacteria | 409 | 1.12e-109 | NTclustered | gi|1980274752|gb|CP068291.1| | 38290 | g6838 | i0 | 98.701 | 347.879668049793 | 231 | 1 | 95 | 2 | 4 | 232 | 1317055 | 1316825 | Corynebacterium macginleyi strain 180208 chromosome, complete genome | blastn | 83839 | 412 | 0.992718446601942 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium macginleyi | ||
| 27759321 | 27759321 | PRJDB14274_S_NODE_6224_length_252_cov_1.251309_g6146_i0 | PRJDB14274 | 6224 | 252 | 1.251309 | 3.15329868 | Streptomyces thinghirensis | 551547 | Bacteria | Bacteria | 42.7 | 0.0387 | NR | MCF2436382.1 | 551547 | g6146 | i0 | 47.7 | 0.523809523809524 | 44 | 21 | 52.4 | 1 | 164 | 33 | 226 | 267 | MCF2436382.1 hypothetical protein [Streptomyces thinghirensis] | diamond | 132 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces thinghirensis | ||
| 28485238 | 28485238 | PRJDB14274_S_NODE_9047_length_211_cov_1.093333_g8969_i0 | PRJDB14274 | 9047 | 211 | 1.093333 | 2.30693263 | Amycolatopsis orientalis | 31958 | Bacteria | Bacteria | 42 | 0.0434 | NR | WP_044855237.1 | 31958 | g8969 | i0 | 39 | 0.838862559241706 | 59 | 35 | 83.9 | 1 | 27 | 203 | 185 | 242 | WP_044855237.1 hypothetical protein [Amycolatopsis orientalis] | diamond | 177 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Amycolatopsis orientalis | ||
| 28674716 | 28674716 | PRJDB14274_S_NODE_3247_length_340_cov_1.458781_g3169_i0 | PRJDB14274 | 3247 | 340 | 1.458781 | 4.9598554 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 93.2 | 7.270000000000001e-21 | NR | MBC7464176.1 | 2900548 | g3169 | i0 | 54.4 | 0.794117647058823 | 90 | 41 | 79.4 | 0 | 3 | 272 | 118 | 207 | MBC7464176.1 NAD(P)H-dependent oxidoreductase [Actinomycetota bacterium] | diamond | 270 | 93.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 30411894 | 30411894 | PRJDB14274_S_NODE_5313_length_271_cov_1.776190_g5235_i0 | PRJDB14274 | 5313 | 271 | 1.77619 | 4.8134749 | Mycolicibacterium iranicum | 912594 | Bacteria | Bacteria | 46.6 | 0.00171 | NR | WP_064281344.1 | 912594 | g5235 | i0 | 35.6 | 0.653136531365314 | 59 | 37 | 64.2 | 1 | 51 | 224 | 151 | 209 | WP_064281344.1 GAP family protein [Mycolicibacterium iranicum] | diamond | 177 | 46.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium iranicum | ||
| 31992204 | 31992204 | PRJDB14274_S_NODE_3778_length_316_cov_1.211765_g3700_i0 | PRJDB14274 | 3778 | 316 | 1.211765 | 3.8291774 | Acidimicrobiia bacterium | 2080302 | Bacteria | Bacteria | 43.9 | 0.02 | NR | HSO95603.1 | 2080302 | g3700 | i0 | 41.7 | 1.36708860759494 | 48 | 28 | 45.6 | 0 | 131 | 274 | 87 | 134 | HSO95603.1 YbhB/YbcL family Raf kinase inhibitor-like protein [Acidimicrobiia bacterium] | diamond | 432 | 43.9 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiia bacterium | |||||
| 32562078 | 32562078 | PRJDB14274_S_NODE_9139_length_210_cov_1.302013_g9061_i0 | PRJDB14274 | 9139 | 210 | 1.302013 | 2.7342273 | Rhodococcus sp. (in: high G+C Gram-positive bacteria) | 1831 | Bacteria | Bacteria | 42.7 | 0.00706 | NR | MER2208681.1 | 1831 | g9061 | i0 | 39.7 | 0.828571428571429 | 58 | 31 | 81.4 | 2 | 172 | 2 | 44 | 98 | MER2208681.1 ADP-ribosylglycohydrolase family protein [Rhodococcus sp. (in: high G+C Gram-positive bacteria)] | diamond | 174 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus sp. (in: high G+C Gram-positive bacteria) |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;