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contig_metadata

3 rows where bioproject = "PRJDB14274" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 3 ✖

tax_clade 1

bioproject 1

  • PRJDB14274 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14036623 14036623 PRJDB14274_S_NODE_812_length_657_cov_32.563758_g740_i0 PRJDB14274 812 657 32.563758 213.94389006 Thermoplasmatales archaeon 2268204 Archaea Archaea 63.9 3.02e-5   NTclustered gi|2573961727|gb|CP133596.1| 2268204 g740 i0 100 0.0974124809741248 34 0 5 0 599 632 518155 518122 MAG: Thermoplasmatales archaeon isolate BR_05 chromosome, complete genome blastn 64 63.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
30443305 30443305 PRJDB14274_S_NODE_8853_length_213_cov_1.559211_g8775_i0 PRJDB14274 8853 213 1.559211 3.32111943 Methanobacterium formicicum 2162 Archaea Archaea 42.7 0.0259   NR WP_048085055.1 2162 g8775 i0 41.9 0.605633802816901 43 25 60.6 0 162 34 145 187 WP_048085055.1 ABC-ATPase domain-containing protein [Methanobacterium formicicum] diamond 129 42.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium formicicum
31075152 31075152 PRJDB14274_S_NODE_7515_length_231_cov_1.370588_g7437_i0 PRJDB14274 7515 231 1.370588 3.16605828 Archaeoglobaceae archaeon 2511821 Archaea Archaea 42.7 0.0298   NR HID42582.1 2511821 g7437 i0 32.8 0.87012987012987 67 44 85.7 1 32 229 103 169 HID42582.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 201 42.7 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;