RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJDB14274", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJDB14274 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27089849 27089849 PRJDB14274_S_NODE_1462_length_503_cov_5.592760_g1386_i0 PRJDB14274 1462 503 5.59276 28.1315828 Chytridiomycetes 451435 Fungi Fungi 173 1.51e-52   NR KAI8920797.1 109895 g1386 i0 78 3.87077534791252 109 24 65 0 502 176 16 124 KAI8920797.1 ribosomal protein S27a, partial [Powellomyces hirtus] diamond 1947 173 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
27664444 27664444 PRJDB14274_S_NODE_5064_length_277_cov_1.412037_g4986_i0 PRJDB14274 5064 277 1.412037 3.91134249 Entophlyctis luteolus 109932 Fungi Fungi 61.2 1.7e-8   NR KAJ3200508.1 109932 g4986 i0 30.3 1.96028880866426 89 62 96.4 0 275 9 152 240 KAJ3200508.1 hypothetical protein HDU82_008828 [Entophlyctis luteolus] diamond 543 61.6 0.993506493506494 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis luteolus
29337737 29337737 PRJDB14274_S_NODE_4529_length_291_cov_1.230435_g4451_i0 PRJDB14274 4529 291 1.230435 3.58056585 Borealophlyctis nickersoniae 2735257 Fungi Fungi 79 1.2e-14   NR KAJ3299393.1 2735257 g4451 i0 77.3 0.896907216494845 44 10 45.4 0 71 202 14 57 KAJ3299393.1 putative histone deacetylase 1-B [Borealophlyctis nickersoniae] diamond 261 79 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Borealophlyctidaceae Borealophlyctis Borealophlyctis nickersoniae
30443302 30443302 PRJDB14274_S_NODE_7553_length_230_cov_3.254438_g7475_i0 PRJDB14274 7553 230 3.254438 7.4852074 Phlyctochytrium planicorne 261098 Fungi Fungi 108 7.18e-26   NR KAJ3103382.1 261098 g7475 i0 65.3 1.85217391304348 72 23 91.3 1 228 19 66 137 KAJ3103382.1 hypothetical protein HDU97_010220 [Phlyctochytrium planicorne] diamond 426 108 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;