contig_metadata
10 rows where bioproject = "PRJDB14274", tax_kingdom = "Bacillati" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 980940 | 980940 | PRJDB14274_S_NODE_5081_length_277_cov_0.782407_g5003_i0 | PRJDB14274 | 5081 | 277 | 0.782407 | 2.16726739 | Streptococcus | 1301 | Bacteria | Bacteria | 490 | 4.56e-134 | NTclustered | gi|1686100227|gb|MK330575.1| | 28037 | g5003 | i0 | 98.556 | 326.194945848375 | 277 | 4 | 100 | 0 | 1 | 277 | 3729 | 4005 | Streptococcus mitis strain PL429 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 90356 | 490 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 20409174 | 20409174 | PRJDB14274_S_NODE_5397_length_269_cov_1.495192_g5319_i0 | PRJDB14274 | 5397 | 269 | 1.495192 | 4.02206648 | Staphylococcus chromogenes | 46126 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|1714031411|gb|CP031274.1| | 46126 | g5319 | i0 | 100 | 0.20817843866171 | 28 | 0 | 10 | 0 | 95 | 122 | 1684686 | 1684713 | Staphylococcus chromogenes strain 17A chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus chromogenes | ||
| 21685148 | 21685148 | PRJDB14274_S_NODE_7478_length_232_cov_0.988304_g7400_i0 | PRJDB14274 | 7478 | 232 | 0.988304 | 2.29286528 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 374 | 3.9e-99 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g7400 | i0 | 95.726 | 567.198275862069 | 234 | 6 | 100 | 4 | 1 | 232 | 3375 | 3606 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 131590 | 374 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 21685156 | 21685156 | PRJDB14274_S_NODE_9978_length_204_cov_0.930070_g9900_i0 | PRJDB14274 | 9978 | 204 | 0.93007 | 1.8973428 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 377 | 2.59e-100 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g9900 | i0 | 100 | 463.132352941176 | 204 | 0 | 100 | 0 | 1 | 204 | 2353 | 2150 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 94479 | 377 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 23933400 | 23933400 | PRJDB14274_S_NODE_10239_length_202_cov_1.007092_g10161_i0 | PRJDB14274 | 10239 | 202 | 1.007092 | 2.03432584 | Streptococcus | 1301 | Bacteria | Bacteria | 363 | 7.149999999999999e-96 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g10161 | i0 | 99.01 | 345.094059405941 | 202 | 2 | 100 | 0 | 1 | 202 | 1571258 | 1571459 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 69709 | 363 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 28138108 | 28138108 | PRJDB14274_S_NODE_5525_length_266_cov_1.409756_g5447_i0 | PRJDB14274 | 5525 | 266 | 1.409756 | 3.74995096 | Sporosarcina sp. P16b | 2048261 | Bacteria | Bacteria | 47 | 0.00152 | NR | WP_199203757.1 | 2048261 | g5447 | i0 | 32.6 | 3.3609022556391 | 86 | 56 | 94.7 | 1 | 1 | 252 | 213 | 298 | WP_199203757.1 dihydrolipoamide acetyltransferase family protein [Sporosarcina sp. P16b] | diamond | 894 | 47 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Sporosarcina | Sporosarcina sp. P16b | ||
| 30158549 | 30158549 | PRJDB14274_S_NODE_5952_length_257_cov_1.928571_g5874_i0 | PRJDB14274 | 5952 | 257 | 1.928571 | 4.95642747 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 112 | 1.53e-27 | NR | MBR7164749.1 | 2044939 | g5874 | i0 | 70.4 | 10.8560311284047 | 71 | 21 | 82.9 | 0 | 257 | 45 | 213 | 283 | MBR7164749.1 UDP-glucose 4-epimerase GalE [Clostridia bacterium] | diamond | 2790 | 112 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 30911350 | 30911350 | PRJDB14274_S_NODE_9134_length_210_cov_1.308725_g9056_i0 | PRJDB14274 | 9134 | 210 | 1.308725 | 2.7483225 | Bacillaceae | 186817 | Bacteria | Bacteria | 71.6 | 6.24e-13 | NR | WP_211560879.1 | 2823519 | g9056 | i0 | 76.6 | 3.35714285714286 | 47 | 11 | 67.1 | 0 | 2 | 142 | 217 | 263 | WP_211560879.1 SDR family NAD(P)-dependent oxidoreductase [Metabacillus flavus] | diamond | 705 | 71.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Metabacillus | Metabacillus flavus | ||
| 31480533 | 31480533 | PRJDB14274_S_NODE_7476_length_232_cov_1.023392_g7398_i0 | PRJDB14274 | 7476 | 232 | 1.023392 | 2.37426944 | Bacillati | 1783272 | Bacteria | Bacteria | 45.8 | 0.00227 | NR | PCZ68894.1 | 1639 | g7398 | i0 | 51.1 | 4.74568965517241 | 47 | 20 | 56.9 | 1 | 80 | 211 | 181 | 227 | PCZ68894.1 excinuclease ABC subunit B, partial [Listeria monocytogenes] | diamond | 1101 | 45.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 31549620 | 31549620 | PRJDB14274_S_NODE_7096_length_238_cov_1.101695_g7018_i0 | PRJDB14274 | 7096 | 238 | 1.101695 | 2.6220341 | uncultured Allofournierella sp. | 1940258 | Bacteria | Bacteria | 42.4 | 0.0199 | NR | WP_395150398.1 | 1940258 | g7018 | i0 | 32.8 | 0.80672268907563 | 64 | 42 | 79.4 | 1 | 199 | 11 | 9 | 72 | WP_395150398.1 hypothetical protein [uncultured Allofournierella sp.] | diamond | 192 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Allofournierella | uncultured Allofournierella sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;