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contig_metadata

11 rows where bioproject = "PRJDB14274" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 11 ✖

bioproject 1

  • PRJDB14274 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3531600 3531600 PRJDB14274_S_NODE_6463_length_248_cov_1.475936_g6385_i0 PRJDB14274 6463 248 1.475936 3.66032128 Eukaryota 2759 Plants Plants 52.8 0.022   NTclustered gi|302835242|ref|XM_002949137.1| 3068 g6385 i0 100 1.69354838709677 28 0 11 0 135 162 5411 5384 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_120738), partial mRNA blastn 420 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
8634077 8634077 PRJDB14274_S_NODE_8927_length_212_cov_1.390728_g8849_i0 PRJDB14274 8927 212 1.390728 2.94834336 Eukaryota 2759 Plants Plants 392 9.67e-105   NTclustered gi|1714003650|gb|MN243923.1| 3079 g8849 i0 100 100.02358490566 212 0 100 0 1 212 62 273 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 21205 392 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
13734446 13734446 PRJDB14274_S_NODE_4631_length_288_cov_1.352423_g4553_i0 PRJDB14274 4631 288 1.352423 3.89497824 Eukaryota 2759 Plants Plants 532 7.8e-147   NTclustered gi|1714003650|gb|MN243923.1| 3079 g4553 i0 100 99.6597222222222 288 0 100 0 1 288 550 837 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 28702 532 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
18832724 18832724 PRJDB14274_S_NODE_9135_length_210_cov_1.302013_g9057_i0 PRJDB14274 9135 210 1.302013 2.7342273 Eukaryota 2759 Plants Plants 52.8 0.018   NTclustered gi|2082259355|ref|XM_043067830.1| 3055 g9057 i0 100 1.6 28 0 13 0 31 58 3556 3583 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g485500v5), mRNA blastn 336 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
29779714 29779714 PRJDB14274_S_NODE_7871_length_226_cov_1.721212_g7793_i0 PRJDB14274 7871 226 1.721212 3.88993912 Chlorella variabilis 554065 Plants Plants 82.4 3.19e-16   NR XP_005851487.1 554065 g7793 i0 64.9 1.52654867256637 57 20 75.7 0 2 172 583 639 XP_005851487.1 hypothetical protein CHLNCDRAFT_137866 [Chlorella variabilis] diamond 345 82.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
30658444 30658444 PRJDB14274_S_NODE_7693_length_229_cov_1.065476_g7615_i0 PRJDB14274 7693 229 1.065476 2.43994004 Eukaryota 2759 Plants Plants 116 3.16e-28   NR PRW20811.1 3076 g7615 i0 72.4 20.9606986899563 76 21 99.6 0 1 228 219 294 PRW20811.1 Receptor of activated kinase C component of 40S small ribosomal subunit isoform C [Chlorella sorokiniana] diamond 4800 117 0.991452991452991 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30942969 30942969 PRJDB14274_S_NODE_8654_length_216_cov_1.109677_g8576_i0 PRJDB14274 8654 216 1.109677 2.39690232 Eukaryota 2759 Plants Plants 45.1 0.00423   NR XP_042914758.1 3055 g8576 i0 35.2 4.77777777777778 71 41 93.1 2 7 207 1472 1541 XP_042914758.1 uncharacterized protein CHLRE_17g723450v5 [Chlamydomonas reinhardtii] diamond 1032 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
31011847 31011847 PRJDB14274_S_NODE_2795_length_366_cov_1.583607_g2717_i0 PRJDB14274 2795 366 1.583607 5.79600162 Chlorella ohadii 2649997 Plants Plants 51.2 1.62e-4   NR KAI7837862.1 2649997 g2717 i0 46.9 0.401639344262295 49 26 40.2 0 3 149 35 83 KAI7837862.1 hypothetical protein COHA_008349 [Chlorella ohadii] diamond 147 51.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella ohadii
31296268 31296268 PRJDB14274_S_NODE_6795_length_243_cov_1.005495_g6717_i0 PRJDB14274 6795 243 1.005495 2.44335285 Gonium pectorale 33097 Plants Plants 69.3 3.82e-12   NR KXZ41057.1 33097 g6717 i0 48.6 1.87654320987654 72 35 86.4 1 8 217 130 201 KXZ41057.1 hypothetical protein GPECTOR_881g129 [Gonium pectorale] diamond 456 69.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
32213799 32213799 PRJDB14274_S_NODE_10398_length_196_cov_2.925926_g10320_i0 PRJDB14274 10398 196 2.925926 5.73481496 Helicosporidium sp. ATCC 5 1907511 Plants Plants 100 1.0999999999999998e-24   NR KDD76381.1 1291522 g10320 i0 68.8 0.979591836734694 64 20 98 0 3 194 71 134 KDD76381.1 hypothetical protein H632_c248p2 [Helicosporidium sp. ATCC 50920] diamond 192 100 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ATCC 50920
32372102 32372102 PRJDB14274_S_NODE_7959_length_225_cov_1.280488_g7881_i0 PRJDB14274 7959 225 1.280488 2.881098 Monoraphidium neglectum 145388 Plants Plants 61.6 2.07e-9   NR XP_013899290.1 145388 g7881 i0 60.9 0.613333333333333 46 18 61.3 0 18 155 147 192 XP_013899290.1 hypothetical protein MNEG_7690 [Monoraphidium neglectum] diamond 138 61.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;