RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB14274", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJDB14274 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3834744 3834744 PRJDB14274_S_NODE_9424_length_208_cov_0.884354_g9346_i0 PRJDB14274 9424 208 0.884354 1.83945632 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 235 1.69e-57   NTclustered gi|238617605|gb|FJ973380.1| 45107 g9346 i0 92.216 74.8317307692308 167 11 80 2 17 183 1473 1309 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 15565 235 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
32624646 32624646 PRJDB14274_S_NODE_5100_length_276_cov_1.590698_g5022_i0 PRJDB14274 5100 276 1.590698 4.39032648 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 70.9 3e-12   NR MES1907185.1 1215613 g5022 i0 64 1.16304347826087 50 18 54.3 0 61 210 1 50 MES1907185.1 hypothetical protein [Cercozoa sp. M6MM] diamond 321 70.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;