RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJDB12578", tax_phylum = "Phixviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 1 ✖

tax_phylum 1

  • Phixviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJDB12578 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3827251 3827251 PRJDB12578_S_NODE_120524_length_242_cov_2.062176_g97466_i0 PRJDB12578 120524 242 2.062176 4.99046592 Tortoise microvirus 93 2583202 Viruses Viruses 52.8 0.022   NTclustered gi|1655476387|gb|MK765646.1| 2583202 g97466 i0 100 0.115702479338843 28 0 12 0 58 85 3117 3090 Tortoise microvirus 93 isolate 93_SP_131, complete genome blastn 28 52.8 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Tortoise microvirus 93

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;