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contig_metadata

7 rows where bioproject = "PRJDB12578", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 7 ✖

tax_clade 1

bioproject 1

  • PRJDB12578 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15310124 15310124 PRJDB12578_S_NODE_88293_length_340_cov_2.371134_g65235_i0 PRJDB12578 88293 340 2.371134 8.0618556 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 545 1.21e-150   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g65235 i0 95.588 51.2382352941176 340 15 100 0 1 340 2236 1897 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 17421 545 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
16283514 16283514 PRJDB12578_S_NODE_168473_length_186_cov_3.386861_g145415_i0 PRJDB12578 168473 186 3.386861 6.29956146 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 327 2.36e-85   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g145415 i0 98.907 86.752688172043 183 2 98 0 1 183 255 437 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 16136 327 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19133932 19133932 PRJDB12578_S_NODE_96956_length_302_cov_2.019763_g73898_i0 PRJDB12578 96956 302 2.019763 6.09968426 Lamtostyla gui 2678605 SAR_Eukaryotes SAR_Eukaryotes 167 9.619999999999998e-37   NTclustered gi|1778223994|gb|MN733822.1| 2678605 g73898 i0 91.2 39.3443708609271 125 8 41 3 86 209 4109 4231 Lamtostyla gui isolate LWY2015111409 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11882 167 1 Eukaryota Sar   Ciliophora Spirotrichea Stichotrichida Amphisiellidae Lamtostyla Lamtostyla gui
20107230 20107230 PRJDB12578_S_NODE_100116_length_291_cov_1.793388_g77058_i0 PRJDB12578 100116 291 1.793388 5.21875908 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 508 1.33e-139   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g77058 i0 98.276 96.6666666666667 290 5 99 0 1 290 1655 1944 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 28130 508 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20107330 20107330 PRJDB12578_S_NODE_182096_length_176_cov_1.637795_g159038_i0 PRJDB12578 182096 176 1.637795 2.8825192 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 303 3.71e-78   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g159038 i0 97.727 98.3636363636364 176 4 100 0 1 176 1487 1662 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 17312 303 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20107332 20107332 PRJDB12578_S_NODE_184336_length_175_cov_1.206349_g161278_i0 PRJDB12578 184336 175 1.206349 2.11111075 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 324 2.83e-84   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g161278 i0 100 98.7028571428571 175 0 100 0 1 175 2591 2765 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 17273 324 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
21382916 21382916 PRJDB12578_S_NODE_154157_length_199_cov_1.373333_g131099_i0 PRJDB12578 154157 199 1.373333 2.73293267 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 368 1.51e-97   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g131099 i0 100 100.241206030151 199 0 100 0 1 199 1182 1380 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 19948 368 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;