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contig_metadata

10 rows where bioproject = "PRJDB12578", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 10 ✖

tax_clade 1

  • Sar · 10 ✖

bioproject 1

  • PRJDB12578 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6381500 6381500 PRJDB12578_S_NODE_175146_length_181_cov_1.962121_g152088_i0 PRJDB12578 175146 181 1.962121 3.55143901 Plasmodium knowlesi 5850 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.015   NTclustered gi|221060455|ref|XM_002260837.1| 5851 g152088 i0 100 0.154696132596685 28 0 15 0 8 35 5944 5917 Plasmodium knowlesi strain H conserved Plasmodium protein, unknown function (PKNH_1345900), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
11183998 11183998 PRJDB12578_S_NODE_104309_length_278_cov_2.406114_g81251_i0 PRJDB12578 104309 278 2.406114 6.68899692 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.5e-4   NTclustered gi|820697327|tpe|LN714495.1| 432359 g81251 i0 97.059 0.244604316546763 34 1 12 0 4 37 1298228 1298195 TPA_asm: Toxoplasma gondii VEG, chromosome chrVI, complete genome blastn 68 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
11481738 11481738 PRJDB12578_S_NODE_192450_length_169_cov_2.066667_g169392_i0 PRJDB12578 192450 169 2.066667 3.49266723 Goussia sp. 2041156 SAR_Eukaryotes SAR_Eukaryotes 62.1 2.34e-5   NTclustered gi|1707497512|gb|MN202591.1| 2041156 g169392 i0 100 17.9763313609467 33 0 20 0 1 33 600 632 Goussia sp. isolate BG28 small subunit ribosomal RNA gene, partial sequence blastn 3038 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia sp.
11482486 11482486 PRJDB12578_S_NODE_215190_length_161_cov_3.142857_g192132_i0 PRJDB12578 215190 161 3.142857 5.05999977 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|1620139553|ref|XM_028675492.1| 85471 g192132 i0 100 0.180124223602484 29 0 18 0 80 108 2295 2267 Plasmodium relictum conserved Plasmodium protein, unknown function (PRELSG_0604200), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
16584393 16584393 PRJDB12578_S_NODE_78014_length_410_cov_1.346260_g54959_i0 PRJDB12578 78014 410 1.34626 5.519666 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.039   NTclustered gi|820702250|tpe|LN714502.1| 432359 g54959 i0 100 0.0682926829268293 28 0 7 0 208 235 2713558 2713585 TPA_asm: Toxoplasma gondii VEG, chromosome chrXII, complete genome blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
20404164 20404164 PRJDB12578_S_NODE_185897_length_174_cov_1.032000_g162839_i0 PRJDB12578 185897 174 1.032 1.79568 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.015   NTclustered gi|1027958967|ref|XM_733927.2| 31271 g162839 i0 100 0.160919540229885 28 0 16 0 133 160 549 576 Plasmodium chabaudi chabaudi ABC transporter B family member 6, putative (PCHAS_1369400), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
21683334 21683334 PRJDB12578_S_NODE_60418_length_658_cov_2.441708_g38045_i0 PRJDB12578 60418 658 2.441708 16.06643864 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.018   NTclustered gi|1145259210|ref|XM_012907452.2| 5854 g38045 i0 100 0.0440729483282675 29 0 4 0 348 376 82 54 Plasmodium reichenowi perforin-like protein 3 partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
24227683 24227683 PRJDB12578_S_NODE_140160_length_213_cov_12.103659_g117102_i0 PRJDB12578 140160 213 12.103659 25.78079367 uncultured Eimeriidae 404735 SAR_Eukaryotes SAR_Eukaryotes 344 2.76e-90   NTclustered gi|134021988|gb|EF023338.1| 404735 g117102 i0 95.775 99.9295774647887 213 9 100 0 1 213 1659 1447 Eimeriidae environmental sample clone Amb_18S_660 18S ribosomal RNA gene, partial sequence blastn 21285 344 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae   uncultured Eimeriidae
24234087 24234087 PRJDB12578_S_NODE_92420_length_320_cov_3.033210_g69362_i0 PRJDB12578 92420 320 3.03321 9.706272 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.03   NTclustered gi|2794779121|ref|XM_067949009.1| 323732 g69362 i0 96.774 0.096875 31 1 10 0 171 201 199 229 Babesia duncani uncharacterized protein (BdWA1_004005), partial mRNA blastn 31 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
28200780 28200780 PRJDB12578_S_NODE_175286_length_181_cov_1.689394_g152228_i0 PRJDB12578 175286 181 1.689394 3.05780314 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 46.6 7e-4   NR CAL7863471.1 1344799 g152228 i0 46.3 0.679558011049724 41 22 68 0 57 179 1342 1382 CAL7863471.1 unnamed protein product [Sarcocystis calchasi] diamond 123 46.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;