contig_metadata
4 rows where bioproject = "PRJDB12578", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2168 | 2168 | PRJDB12578_S_NODE_148901_length_204_cov_1.658065_g125843_i0 | PRJDB12578 | 148901 | 204 | 1.658065 | 3.3824526 | uncultured clinical Chlamydiales bacterium | 227484 | Bacteria | Bacteria | 298 | 2.07e-76 | NTclustered | gi|407196282|gb|JX559647.1| | 227484 | g125843 | i0 | 100 | 98 | 161 | 0 | 79 | 0 | 44 | 204 | 1 | 161 | Uncultured clinical Chlamydiales bacterium clone CRG100 16S ribosomal RNA gene, partial sequence | blastn | 19992 | 298 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured clinical Chlamydiales bacterium | |||
| 2553828 | 2553828 | PRJDB12578_S_NODE_196523_length_168_cov_0.865546_g173465_i0 | PRJDB12578 | 196523 | 168 | 0.865546 | 1.45411728 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 220 | 3.66e-53 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g173465 | i0 | 90.533 | 107.577380952381 | 169 | 12 | 99 | 4 | 1 | 166 | 653679 | 653512 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 18073 | 220 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 19127701 | 19127701 | PRJDB12578_S_NODE_146896_length_206_cov_1.643312_g123838_i0 | PRJDB12578 | 146896 | 206 | 1.643312 | 3.38522272 | Candidatus Protochlamydia amoebophila | 362787 | Bacteria | Bacteria | 320 | 4.47e-83 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g123838 | i0 | 94.66 | 116.04854368932 | 206 | 11 | 100 | 0 | 1 | 206 | 2153552 | 2153757 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 23906 | 320 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 29205724 | 29205724 | PRJDB12578_S_NODE_205109_length_165_cov_0.896552_g182051_i0 | PRJDB12578 | 205109 | 165 | 0.896552 | 1.4793108 | Bacteria | 2 | Bacteria | Bacteria | 85.9 | 1.45e-19 | NR | PIS00683.1 | 1973935 | g182051 | i0 | 72.2 | 2.94545454545455 | 54 | 15 | 98.2 | 0 | 164 | 3 | 73 | 126 | PIS00683.1 MAG: DNA-binding protein [Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9] | diamond | 486 | 86.7 | 0.990772779700115 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;