RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB12578" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJDB12578 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27221823 27221823 PRJDB12578_S_NODE_92323_length_321_cov_1.404412_g69265_i0 PRJDB12578 92323 321 1.404412 4.50816252 Parcubacteria group bacterium GW2 2026774 Bacteria Bacteria 43.5 0.0439   NR KKU82292.1 1618847 g69265 i0 32.6 0.429906542056075 46 29 43 1 144 281 110 153 KKU82292.1 MAG: Glycosyl transferase [Parcubacteria group bacterium GW2011_GWA2_47_8] diamond 138 43.5 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium GW2011_GWA2_47_8
31454539 31454539 PRJDB12578_S_NODE_136376_length_218_cov_1.508876_g113318_i0 PRJDB12578 136376 218 1.508876 3.28934968 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 42.4 0.0167   NR MCA9333263.1 2026720 g113318 i0 34.3 0.922018348623853 67 42 90.8 2 20 217 5 70 MCA9333263.1 F0F1 ATP synthase subunit delta [Candidatus Saccharibacteria bacterium] diamond 201 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;