RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJDB12134", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJDB12134 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7652392 7652392 PRJDB12134_P_NODE_5587_length_442_cov_2.739837_g5453_i0 PRJDB12134 5587 442 2.739837 12.11007954 Bradybaena similaris 145626 Mollusca Mollusca 84.2 1.52e-11   NTclustered gi|2912997258|dbj|AP039602.1| 145626 g5453 i0 71.496 28.0180995475113 421 89 90 30 47 442 54270254 54270668 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 21, sequence blastn 12384 84.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
32461071 32461071 PRJDB12134_P_NODE_12199_length_254_cov_1.629834_g12064_i0 PRJDB12134 12199 254 1.629834 4.13977836 Mytilus 6548 Mollusca Mollusca 65.5 3.72e-10   NR CAG2226471.1 6550 g12064 i0 59.3 5.72834645669291 54 22 63.8 0 252 91 13 66 CAG2226471.1 unnamed protein product [Mytilus edulis] diamond 1455 65.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;