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contig_metadata

13 rows where analysis = "diamond" and tax_phylum = "Candidatus Niyogiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Niyogiibacteriota · 13 ✖

tax_clade 1

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17793 17793 PRJEB11748_P_NODE_300061_length_219_cov_6.841772_g297878_i0 PRJEB11748 300061 219 6.841772 14.98348068 Candidatus Niyogibacteria bacterium CG1 2750078 Bacteria Bacteria 93.2 2.44e-22   NR PIR70272.1 1974725 g297878 i0 63.9 1.67123287671233 61 22 83.6 0 35 217 45 105 PIR70272.1 MAG: very short patch repair endonuclease [Candidatus Niyogibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_42_19] diamond 366 93.2 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_42_19
27187546 27187546 PRJNA556992_P_NODE_736282_length_249_cov_2.193182_g734093_i0 PRJNA556992 736282 249 2.193182 5.46102318 Bacteria 2 Bacteria Bacteria 80.9 1.52e-15   NR QQG46606.1 2750078 g734093 i0 48.8 2.02409638554217 84 42 100 1 1 249 309 392 QQG46606.1 MAG: hypothetical protein HYY55_02050 [Candidatus Niyogibacteria bacterium] diamond 504 80.9 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium
28154457 28154457 PRJNA615351_P_NODE_177765_length_158_cov_1.292683_g163665_i0 PRJNA615351 177765 158 1.292683 2.04243914 Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_ 2750078 Bacteria Bacteria 66.6 4.15e-11   NR OGZ28590.1 1801723 g163665 i0 57.4 0.892405063291139 47 20 89.2 0 3 143 192 238 OGZ28590.1 MAG: hypothetical protein A2835_03935 [Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28] diamond 141 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28
28179888 28179888 PRJNA340009_P_NODE_36546_length_209_cov_1.275000_g36239_i0 PRJNA340009 36546 209 1.275 2.66475 Candidatus Niyogibacteria bacterium RIFCSPLOWO2_ 2750078 Bacteria Bacteria 78.2 7.01e-15   NR OGZ29909.1 1801724 g36239 i0 89.5 0.545454545454545 38 4 54.5 0 53 166 177 214 OGZ29909.1 MAG: hypothetical protein A2931_00885 [Candidatus Niyogibacteria bacterium RIFCSPLOWO2_01_FULL_45_48] diamond 114 78.2 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium RIFCSPLOWO2_01_FULL_45_48
28457116 28457116 PRJNA1073005_P_NODE_9086_length_250_cov_0.870056_g8967_i0 PRJNA1073005 9086 250 0.870056 2.17514 Candidatus Niyogibacteria bacterium 2750078 Bacteria Bacteria 44.7 0.00759   NR MBI5742705.1 2750078 g8967 i0 39.1 0.768 64 33 72 3 66 245 188 249 MBI5742705.1 TPM domain-containing protein [Candidatus Niyogibacteria bacterium] diamond 192 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium
29145013 29145013 PRJNA382357_P_NODE_40489_length_360_cov_5.561873_g39750_i0 PRJNA382357 40489 360 5.561873 20.0227428 Pseudomonadati 3379134 Bacteria Bacteria 65.1 2.09e-9   NR MBI1957008.1 2750078 g39750 i0 62.8 1.38333333333333 43 16 35.8 0 39 167 236 278 MBI1957008.1 hypothetical protein [Candidatus Niyogibacteria bacterium] diamond 498 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium
29527297 29527297 PRJDB4941_P_NODE_39110_length_164_cov_0.904348_g38342_i0 PRJDB4941 39110 164 0.904348 1.48313072 Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13 1801726 Bacteria Bacteria 68.2 1.34e-11   NR OGZ31573.1 1801726 g38342 i0 83.3 0.658536585365854 36 6 65.9 0 57 164 1 36 OGZ31573.1 MAG: UDP-glucose 6-dehydrogenase [Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13] diamond 108 68.2 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13
29660835 29660835 PRJNA1148190_P_NODE_85910_length_585_cov_1.632812_g74777_i0 PRJNA1148190 85910 585 1.632812 9.5519502 Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13 1801726 Bacteria Bacteria 246 3.08e-78   NR OGZ31570.1 1801726 g74777 i0 63.2 0.98974358974359 193 71 99 0 580 2 61 253 OGZ31570.1 MAG: hypothetical protein A3H02_02580 [Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13] diamond 579 246 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13
30580747 30580747 PRJNA404067_P_NODE_31653_length_208_cov_2.571429_g31266_i0 PRJNA404067 31653 208 2.571429 5.34857232 Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13 1801726 Bacteria Bacteria 58.9 4.74e-8   NR OGZ31561.1 1801726 g31266 i0 45.3 0.923076923076923 64 32 92.3 1 207 16 1596 1656 OGZ31561.1 MAG: hypothetical protein A3H02_02535 [Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13] diamond 192 58.9 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13
30737278 30737278 PRJNA168635_P_NODE_15094_length_207_cov_1.189873_g14678_i0 PRJNA168635 15094 207 1.189873 2.46303711 Candidatus Niyogibacteria bacterium RIFCSPLOWO2_ 2750078 Bacteria Bacteria 40.8 0.0208   NR OGZ31266.1 1801725 g14678 i0 38.2 0.797101449275362 55 33 79.7 1 14 178 24 77 OGZ31266.1 MAG: hypothetical protein A3J00_01855 [Candidatus Niyogibacteria bacterium RIFCSPLOWO2_02_FULL_45_13] diamond 165 40.8 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium RIFCSPLOWO2_02_FULL_45_13
31243740 31243740 PRJNA340009_P_NODE_63075_length_167_cov_0.864407_g62768_i0 PRJNA340009 63075 167 0.864407 1.44355969 Candidatus Niyogibacteria bacterium 2750078 Bacteria Bacteria 72.8 3.35e-13   NR MBI1956949.1 2750078 g62768 i0 73.8 2.26347305389222 42 11 75.4 0 1 126 536 577 MBI1956949.1 DNA polymerase/3'-5' exonuclease PolX [Candidatus Niyogibacteria bacterium] diamond 378 72.8 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium
32697996 32697996 PRJNA315399_P_NODE_469960_length_154_cov_3.239316_g469512_i0 PRJNA315399 469960 154 3.239316 4.98854664 Candidatus Niyogibacteria bacterium 2750078 Bacteria Bacteria 59.3 1.51e-8   NR MBI4114666.1 2750078 g469512 i0 61.4 0.857142857142857 44 17 85.7 0 137 6 178 221 MBI4114666.1 HD domain-containing protein [Candidatus Niyogibacteria bacterium] diamond 132 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium
32700680 32700680 PRJNA513467_S_NODE_7000_length_160_cov_1.585366_g6977_i0 PRJNA513467 7000 160 1.585366 2.5365856 Candidatus Niyogibacteria bacterium 2750078 Bacteria Bacteria 43.9 0.00206   NR MBI2038746.1 2750078 g6977 i0 69.4 0.675 36 10 67.5 1 3 110 104 138 MBI2038746.1 30S ribosomal protein S6 [Candidatus Niyogibacteria bacterium] diamond 108 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;