RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where analysis = "diamond" and tax_clade = "RNA satellites"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • RNA satellites · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22680293 22680293 PRJNA1020854_S_NODE_7038_length_591_cov_549.135231_g4457_i0 PRJNA1020854 7038 591 549.135231 3245.38921521 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 159 1.98e-43   NR NP_624321.1 99930 g4457 i0 68.1 0.573604060913706 113 34 57.4 1 68 406 292 402 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 339 159 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA
27434161 27434161 PRJNA841653_P_NODE_13343_length_452_cov_0.970976_g12672_i0 PRJNA841653 13343 452 0.970976 4.38881152 Rhodosporidiobolus odoratus dsRNA Virus 1 satellite 2787046 Viruses Viruses 67.4 3e-11   NR QPH36702.1 2787046 g12672 i0 50.7 0.484513274336283 73 31 48.5 2 364 146 49 116 QPH36702.1 Satellite-like RNA [Rhodosporidiobolus odoratus dsRNA Virus 1 satellite] diamond 219 67.4 1 Viruses RNA satellites             Rhodosporidiobolus odoratus dsRNA Virus 1 satellite
28315329 28315329 PRJNA715462_P_NODE_4346_length_1210_cov_15.648197_g3819_i0 PRJNA715462 4346 1210 15.648197 189.3431837 Green Sichuan pepper nepovirus satellite 2851655 Viruses Viruses 132 5.73e-31   NR QWY93777.1 2851655 g3819 i0 34.7 1.70578512396694 331 176 77.1 16 1073 141 55 365 QWY93777.1 hypothetical protein [Green Sichuan pepper nepovirus satellite] diamond 2064 132 1 Viruses RNA satellites             Green Sichuan pepper nepovirus satellite
28320804 28320804 PRJNA971593_P_NODE_12146_length_347_cov_0.923358_g11997_i0 PRJNA971593 12146 347 0.923358 3.20405226 Cnidiuim virus associated satellite 3133206 Viruses Viruses 147 3.15e-41   NR WXB65927.1 3133206 g11997 i0 77.2 0.873198847262248 101 22 87.3 1 45 347 8 107 WXB65927.1 31 kDa protein [Cnidiuim virus associated satellite] diamond 303 147 1 Viruses RNA satellites             Cnidiuim virus associated satellite
28352384 28352384 PRJNA971593_P_NODE_19626_length_268_cov_1.543590_g19477_i0 PRJNA971593 19626 268 1.54359 4.1368212 Cnidiuim virus associated satellite 3133206 Viruses Viruses 125 2.68e-33   NR WXB65927.1 3133206 g19477 i0 70 1.00746268656716 90 24 98.5 2 3 266 121 209 WXB65927.1 31 kDa protein [Cnidiuim virus associated satellite] diamond 270 125 1 Viruses RNA satellites             Cnidiuim virus associated satellite
29676554 29676554 PRJNA906294_P_NODE_121810_length_359_cov_3.653846_g117694_i0 PRJNA906294 121810 359 3.653846 13.11730714 Cnidiuim virus associated satellite 3133206 Viruses Viruses 174 1.48e-51   NR WXB65927.1 3133206 g117694 i0 81.4 0.81058495821727 97 18 81.1 0 358 68 181 277 WXB65927.1 31 kDa protein [Cnidiuim virus associated satellite] diamond 291 174 1 Viruses RNA satellites             Cnidiuim virus associated satellite
30510193 30510193 PRJNA1112809_P_NODE_159213_length_255_cov_1.445055_g155938_i0 PRJNA1112809 159213 255 1.445055 3.68489025 Strawberry latent ringspot virus satellite RNA 195062 Viruses Viruses 75.9 3.81e-14   NR WIU81415.1 195062 g155938 i0 56.1 0.964705882352941 82 32 92.9 2 15 251 13 93 WIU81415.1 hypothetical protein [Strawberry latent ringspot virus satellite RNA] diamond 246 75.9 1 Viruses RNA satellites             Strawberry latent ringspot virus satellite RNA
30745459 30745459 PRJNA680334_S_NODE_5214_length_381_cov_8.295977_g4729_i0 PRJNA680334 5214 381 8.295977 31.60767237 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 112 2.11e-26   NR NP_624321.1 99930 g4729 i0 73.6 0.566929133858268 72 17 55.1 1 2 211 331 402 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 216 112 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA
31063212 31063212 PRJNA715462_P_NODE_4435_length_1193_cov_8.111607_g3904_i0 PRJNA715462 4435 1193 8.111607 96.77147151 Green Sichuan pepper nepovirus satellite 2851655 Viruses Viruses 131 9.82e-31   NR QWY93767.1 2851655 g3904 i0 31.9 2.62782900251467 357 204 85 14 1137 124 28 364 QWY93767.1 hypothetical protein [Green Sichuan pepper nepovirus satellite] diamond 3135 131 1 Viruses RNA satellites             Green Sichuan pepper nepovirus satellite
32034062 32034062 PRJNA285816_S_NODE_838_length_686_cov_3.149137_g772_i0 PRJNA285816 838 686 3.149137 21.60307982 Bamboo mosaic virus satellite RNA 190811 Viruses Viruses 107 1.28e-25   NR AJO26629.1 190811 g772 i0 51.1 0.787172011661808 90 44 39.4 0 499 230 25 114 AJO26629.1 P20 protein, partial [Bamboo mosaic virus satellite RNA] diamond 540 107 1 Viruses RNA satellites             Bamboo mosaic virus satellite RNA
32908151 32908151 PRJEB14175_P_NODE_103129_length_351_cov_2.634483_g100863_i0 PRJEB14175 103129 351 2.634483 9.24703533 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 48.9 7.98e-4   NR NP_624321.1 99930 g100863 i0 34.4 0.82051282051282 96 60 81.2 3 338 54 141 234 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 288 48.9 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA
33062258 33062258 PRJEB14175_P_NODE_141493_length_287_cov_8.283186_g139226_i0 PRJEB14175 141493 287 8.283186 23.77274382 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 48.1 7.58e-4   NR NP_624321.1 99930 g139226 i0 66.7 0.313588850174216 30 10 31.4 0 276 187 373 402 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 90 48.1 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;