RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "diamond", tax_clade = "Provora" and tax_phylum = "Nebulidia"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nebulidia · 5 ✖

tax_clade 1

  • Provora · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16757566 16757566 PRJNA1067370_P_NODE_15474_length_470_cov_2.100756_g14926_i0 PRJNA1067370 15474 470 2.100756 9.8735532 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 181 3.4399999999999986e-55   NR YP_009446453.1 2044563 g14926 i0 85.6 110.1 97 14 61.9 0 292 2 7 103 YP_009446453.1 NADH dehydrogenase subunit 10 [Ancoracysta twista] diamond 51747 182 0.994505494505495 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
28392142 28392142 PRJEB66218_P_NODE_61066_length_420_cov_2.183844_g58645_i0 PRJEB66218 61066 420 2.183844 9.1721448 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 70.5 2.05e-11   NR YP_009446442.1 2044563 g58645 i0 50 1.37142857142857 64 32 45.7 0 314 123 104 167 YP_009446442.1 cytochrome c oxidase subunit III [Ancoracysta twista] diamond 576 70.5 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
28815925 28815925 PRJNA564810_S_NODE_7368_length_219_cov_2.207792_g7346_i0 PRJNA564810 7368 219 2.207792 4.83506448 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 49.3 7.05e-6   NR YP_009446473.1 2044563 g7346 i0 46 1.23287671232877 50 27 68.5 0 196 47 1 50 YP_009446473.1 Sec-independent protein translocase component TatA/E [Ancoracysta twista] diamond 270 49.3 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
29622108 29622108 PRJEB14803_P_NODE_32610_length_188_cov_1.294118_g32144_i0 PRJEB14803 32610 188 1.294118 2.43294184 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 102 6.11e-25   NR ATY40842.1 2044563 g32144 i0 71 1.97872340425532 62 18 98.9 0 188 3 56 117 ATY40842.1 holocytochrome c synthase, partial [Ancoracysta twista] diamond 372 102 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
32685020 32685020 PRJNA564013_P_NODE_313100_length_217_cov_4.916667_g310248_i0 PRJNA564013 313100 217 4.916667 10.66916739 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.4 1.97e-9   NR YP_009446442.1 2044563 g310248 i0 57.4 10.6175115207373 47 20 65 0 1 141 106 152 YP_009446442.1 cytochrome c oxidase subunit III [Ancoracysta twista] diamond 2304 62.8 0.993630573248408 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;