RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond" and tax_clade = "Human papillomavirus types"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Human papillomavirus types · 2 ✖

bioproject 1

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18541004 18541004 PRJNA704949_P_NODE_1409555_length_209_cov_1.625000_g1394217_i0 PRJNA704949 1409555 209 1.625 3.39625 Human papillomavirus type 221 2200958 Viruses Viruses 131 1.05e-33   NR AWK28211.1 2200958 g1394217 i0 89.9 3.96172248803828 69 7 99 0 2 208 302 370 AWK28211.1 E1 protein [Human papillomavirus type 221] diamond 828 131 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus type 221
32106173 32106173 PRJNA704949_P_NODE_1570138_length_195_cov_1.287671_g1554799_i0 PRJNA704949 1570138 195 1.287671 2.51095845 Human papillomavirus type 221 2200958 Viruses Viruses 129 5.84e-33   NR AWK28211.1 2200958 g1554799 i0 89.1 2.95384615384615 64 7 98.5 0 193 2 369 432 AWK28211.1 E1 protein [Human papillomavirus type 221] diamond 576 129 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus type 221

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;