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contig_metadata

9 rows where analysis = "diamond", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Raymondiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Raymondiibacteriota · 9 ✖

tax_clade 1

  • Bacteria candidate phyla · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18189299 18189299 PRJNA1237347_P_NODE_168775_length_485_cov_2.177184_g162206_i0 PRJNA1237347 168775 485 2.177184 10.5593424 Candidatus Raymondbacteria bacterium RIFOXYA2_FULL_49_16 1817885 Bacteria Bacteria 271 3.72e-85   NR OGJ90715.1 1817885 g162206 i0 75.8 0.995876288659794 161 39 99.6 0 483 1 270 430 OGJ90715.1 MAG: phosphoenolpyruvate carboxykinase [Candidatus Raymondbacteria bacterium RIFOXYA2_FULL_49_16] diamond 483 271 1 Bacteria Bacteria candidate phyla   Candidatus Raymondiibacteriota         Candidatus Raymondbacteria bacterium RIFOXYA2_FULL_49_16
22706209 22706209 PRJNA1123436_P_NODE_125698_length_241_cov_0.916667_g124484_i0 PRJNA1123436 125698 241 0.916667 2.20916747 Candidatus Raymondbacteria bacterium RifOxyA12_full_5 1817884 Bacteria Bacteria 104 2.62e-25   NR OGJ86465.1 1817884 g124484 i0 70.6 3.37344398340249 68 20 84.6 0 1 204 186 253 OGJ86465.1 MAG: oxidoreductase [Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37] diamond 813 104 1 Bacteria Bacteria candidate phyla   Candidatus Raymondiibacteriota         Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37
27696821 27696821 PRJEB12982_P_NODE_9524_length_230_cov_0.944751_g9361_i0 PRJEB12982 9524 230 0.944751 2.1729273 Candidatus Raymondbacteria bacterium RifOxyA12_full_5 1817884 Bacteria Bacteria 42.7 0.0321   NR OGJ89351.1 1817884 g9361 i0 36.8 0.743478260869565 57 36 74.3 0 199 29 499 555 OGJ89351.1 MAG: hypothetical protein A2268_08485 [Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37] diamond 171 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Raymondiibacteriota         Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37
28305266 28305266 PRJNA1242190_S_NODE_12906_length_246_cov_1.710983_g12899_i0 PRJNA1242190 12906 246 1.710983 4.20901818 Candidatus Raymondbacteria bacterium RifOxyA12_full_5 1817884 Bacteria Bacteria 44.3 0.0111   NR OGJ89351.1 1817884 g12899 i0 35.1 0.695121951219512 57 37 69.5 0 241 71 499 555 OGJ89351.1 MAG: hypothetical protein A2268_08485 [Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37] diamond 171 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Raymondiibacteriota         Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37
28452207 28452207 PRJNA704949_P_NODE_2180466_length_162_cov_0.920354_g2165127_i0 PRJNA704949 2180466 162 0.920354 1.49097348 Bacteria 2 Bacteria Bacteria 91.7 5.4e-20   NR OGJ86107.1 1817884 g2165127 i0 70.4 10 54 16 100 0 1 162 278 331 OGJ86107.1 MAG: hypothetical protein A2268_02715 [Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37] diamond 1620 92 0.996739130434783 Bacteria Bacteria candidate phyla   Candidatus Raymondiibacteriota         Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37
29286814 29286814 PRJNA492406_P_NODE_27609_length_249_cov_0.875000_g27310_i0 PRJNA492406 27609 249 0.875 2.17875 Candidatus Raymondbacteria bacterium RIFOXYA2_FULL_49_16 1817885 Bacteria Bacteria 59.7 4e-8   NR OGJ87464.1 1817885 g27310 i0 47.6 3.51807228915663 63 32 75.9 1 54 242 192 253 OGJ87464.1 MAG: hypothetical protein A2248_22035 [Candidatus Raymondbacteria bacterium RIFOXYA2_FULL_49_16] diamond 876 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Raymondiibacteriota         Candidatus Raymondbacteria bacterium RIFOXYA2_FULL_49_16
29686032 29686032 PRJEB64798_P_NODE_220650_length_162_cov_1.690265_g218884_i0 PRJEB64798 220650 162 1.690265 2.7382293 Candidatus Raymondbacteria bacterium RifOxyA12_full_5 1817884 Bacteria Bacteria 59.3 1.6e-8   NR OGJ88290.1 1817884 g218884 i0 90.4 2.2962962962963 52 5 96.3 0 158 3 241 292 OGJ88290.1 MAG: hypothetical protein A2268_05250 [Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37] diamond 372 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Raymondiibacteriota         Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37
29899143 29899143 PRJNA946307_P_NODE_113911_length_178_cov_1.496124_g113037_i0 PRJNA946307 113911 178 1.496124 2.66310072 Candidatus Raymondbacteria bacterium RifOxyA12_full_5 1817884 Bacteria Bacteria 76.3 2.39e-14   NR OGJ87545.1 1817884 g113037 i0 62.3 3.58988764044944 53 20 89.3 0 11 169 372 424 OGJ87545.1 MAG: hypothetical protein A2268_03840 [Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37] diamond 639 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Raymondiibacteriota         Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37
31438188 31438188 PRJNA565584_P_NODE_50716_length_417_cov_13.441860_g49565_i0 PRJNA565584 50716 417 13.44186 56.0525562 Candidatus Raymondbacteria bacterium RifOxyA12_full_5 1817884 Bacteria Bacteria 44.7 0.0494   NR OGJ89351.1 1817884 g49565 i0 35.1 0.410071942446043 57 37 41 0 149 319 499 555 OGJ89351.1 MAG: hypothetical protein A2268_08485 [Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37] diamond 171 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Raymondiibacteriota         Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;