contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJNA999747" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6083785 | 6083785 | PRJNA999747_S_NODE_585_length_355_cov_2.435185_g553_i0 | PRJNA999747 | 585 | 355 | 2.435185 | 8.64490675 | Lactovum miscens | 190387 | Bacteria | Bacteria | 220 | 8.96e-71 | NR | WP_331035919.1 | 190387 | g553 | i0 | 96.4 | 0.938028169014084 | 111 | 4 | 93.8 | 0 | 6 | 338 | 96 | 206 | WP_331035919.1 SGNH/GDSL hydrolase family protein [Lactovum miscens] | diamond | 333 | 220 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactovum | Lactovum miscens | ||
| 14027989 | 14027989 | PRJNA999747_S_NODE_11_length_1259_cov_11.333876_g9_i0 | PRJNA999747 | 11 | 1259 | 11.333876 | 142.69349884 | Deinococcus multiflagellatus | 1656887 | Bacteria | Bacteria | 308 | 2.8199999999999993e-96 | NR | WP_224605023.1 | 1656887 | g9 | i0 | 51.9 | 0.822081016679905 | 345 | 156 | 82.2 | 3 | 1157 | 123 | 52 | 386 | WP_224605023.1 S8 family peptidase [Deinococcus multiflagellatus] | diamond | 1035 | 308 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus multiflagellatus | ||
| 26646395 | 26646395 | PRJNA999747_S_NODE_1881_length_220_cov_3.518519_g1849_i0 | PRJNA999747 | 1881 | 220 | 3.518519 | 7.7407418 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 95.5 | 1.1199999999999999e-23 | NR | NOZ88117.1 | 2026735 | g1849 | i0 | 60.6 | 2.89090909090909 | 71 | 28 | 96.8 | 0 | 214 | 2 | 2 | 72 | NOZ88117.1 RNA-binding protein [Deltaproteobacteria bacterium] | diamond | 636 | 95.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28479365 | 28479365 | PRJNA999747_S_NODE_3746_length_163_cov_2.560606_g3714_i0 | PRJNA999747 | 3746 | 163 | 2.560606 | 4.17378778 | Lactovum miscens | 190387 | Bacteria | Bacteria | 116 | 2.24e-31 | NR | WP_414672544.1 | 190387 | g3714 | i0 | 100 | 0.975460122699387 | 53 | 0 | 97.5 | 0 | 5 | 163 | 21 | 73 | WP_414672544.1 SGNH/GDSL hydrolase family protein [Lactovum miscens] | diamond | 159 | 116 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactovum | Lactovum miscens | ||
| 29022274 | 29022274 | PRJNA999747_S_NODE_4348_length_153_cov_1.819672_g4316_i0 | PRJNA999747 | 4348 | 153 | 1.819672 | 2.78409816 | root | 1 | Root_unresolved | Root_unresolved | 79.3 | 7.73e-17 | NR | WP_069817073.1 | 549819 | g4316 | i0 | 74.5 | 9.82352941176471 | 47 | 12 | 92.2 | 0 | 9 | 149 | 94 | 140 | WP_069817073.1 hypothetical protein [Streptomyces sp. TP-A0874] | diamond | 1503 | 79.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. TP-A0874 | ||
| 29205719 | 29205719 | PRJNA999747_S_NODE_4509_length_150_cov_4.470588_g4477_i0 | PRJNA999747 | 4509 | 150 | 4.470588 | 6.705882 | Evansella halocellulosilytica | 2011013 | Bacteria | Bacteria | 41.6 | 0.0267 | NR | WP_218839267.1 | 2011013 | g4477 | i0 | 42.5 | 0.8 | 40 | 23 | 80 | 0 | 143 | 24 | 397 | 436 | WP_218839267.1 glycosyl hydrolase family 18 protein [Evansella halocellulosilytica] | diamond | 120 | 41.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Evansella | Evansella halocellulosilytica | ||
| 29584097 | 29584097 | PRJNA999747_S_NODE_1990_length_215_cov_3.576087_g1958_i0 | PRJNA999747 | 1990 | 215 | 3.576087 | 7.68858705 | Porphyromonas gingivalis F | 837 | Bacteria | Bacteria | 78.2 | 2.56e-17 | NR | ERJ68952.1 | 1227271 | g1958 | i0 | 100 | 3 | 35 | 0 | 48.8 | 0 | 110 | 214 | 1 | 35 | ERJ68952.1 hypothetical protein HMPREF1555_00132 [Porphyromonas gingivalis F0570] | diamond | 645 | 78.2 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Porphyromonadaceae | Porphyromonas | Porphyromonas gingivalis | |
| 30437540 | 30437540 | PRJNA999747_S_NODE_1993_length_215_cov_2.869565_g1961_i0 | PRJNA999747 | 1993 | 215 | 2.869565 | 6.16956475 | Mangrovibacterium diazotrophicum | 1261403 | Bacteria | Bacteria | 42 | 0.0498 | NR | WP_170154523.1 | 1261403 | g1961 | i0 | 36.4 | 0.92093023255814 | 66 | 40 | 92.1 | 1 | 1 | 198 | 92 | 155 | WP_170154523.1 G8 domain-containing protein [Mangrovibacterium diazotrophicum] | diamond | 198 | 42 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Marinilabiliales | Prolixibacteraceae | Mangrovibacterium | Mangrovibacterium diazotrophicum | |
| 30664276 | 30664276 | PRJNA999747_S_NODE_2253_length_204_cov_2.473988_g2221_i0 | PRJNA999747 | 2253 | 204 | 2.473988 | 5.04693552 | Prevotellaceae | 171552 | Bacteria | Bacteria | 43.9 | 0.00479 | NR | EFC67102.1 | 575615 | g2221 | i0 | 59 | 2.35294117647059 | 39 | 16 | 57.4 | 0 | 204 | 88 | 56 | 94 | EFC67102.1 LOW QUALITY PROTEIN: hypothetical protein HMPREF0670_02906, partial [Prevotella sp. oral taxon 317 str. F0108] | diamond | 480 | 44.3 | 0.99097065462754 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella sp. oral taxon 317 | |
| 31005963 | 31005963 | PRJNA999747_S_NODE_414_length_403_cov_3.661290_g382_i0 | PRJNA999747 | 414 | 403 | 3.66129 | 14.7549987 | Anaerolineales bacterium | 2073117 | Bacteria | Bacteria | 79 | 1.88e-14 | NR | TEU08213.1 | 2073117 | g382 | i0 | 44 | 0.558312655086849 | 75 | 42 | 55.8 | 0 | 11 | 235 | 66 | 140 | TEU08213.1 MAG: hypothetical protein E3J25_12350, partial [Anaerolineales bacterium] | diamond | 225 | 79 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 32492776 | 32492776 | PRJNA999747_S_NODE_2679_length_190_cov_1.729560_g2647_i0 | PRJNA999747 | 2679 | 190 | 1.72956 | 3.286164 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 43.5 | 0.00894 | NR | MEI9917451.1 | 1898104 | g2647 | i0 | 43.6 | 0.868421052631579 | 55 | 29 | 83.7 | 2 | 169 | 11 | 44 | 98 | MEI9917451.1 DUF4114 domain-containing protein [Bacteroidota bacterium] | diamond | 165 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 32618875 | 32618875 | PRJNA999747_S_NODE_2600_length_192_cov_2.919255_g2568_i0 | PRJNA999747 | 2600 | 192 | 2.919255 | 5.6049696 | Novosphingobium sp. | 1874826 | Bacteria | Bacteria | 57 | 1.73e-7 | NR | MCK9544286.1 | 1874826 | g2568 | i0 | 42.6 | 0.84375 | 54 | 31 | 84.4 | 0 | 164 | 3 | 158 | 211 | MCK9544286.1 peroxidase family protein [Novosphingobium sp.] | diamond | 162 | 57 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Novosphingobium | Novosphingobium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;