RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA999747" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA999747 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21382745 21382745 PRJNA999747_S_NODE_3037_length_179_cov_2.337838_g3005_i0 PRJNA999747 3037 179 2.337838 4.18473002 root 1 Root_unresolved Root_unresolved 102 1.6700000000000002e-26   NR CAG8741682.1 60492 g3005 i0 87.7 41.0949720670391 57 7 95.5 0 174 4 50 106 CAG8741682.1 6520_t:CDS:1, partial [Racocetra fulgida] diamond 7356 103 0.990291262135922 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Racocetra Racocetra fulgida
29211528 29211528 PRJNA999747_S_NODE_2569_length_193_cov_2.753086_g2537_i0 PRJNA999747 2569 193 2.753086 5.31345598 Opisthokonta 33154 Fungi Fungi 67.8 3.33e-12   NR KAI8890078.1 1314798 g2537 i0 75.6 1.9119170984456 41 10 63.7 0 4 126 125 165 KAI8890078.1 peptidyl-prolyl cis-trans isomerase cyclophilin type [Backusella circina FSU 941] diamond 369 67.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Backusellaceae Backusella Backusella circina
32593383 32593383 PRJNA999747_S_NODE_1719_length_230_cov_2.547739_g1687_i0 PRJNA999747 1719 230 2.547739 5.8597997 Fungi 4751 Fungi Fungi 72.4 1.76e-13   NR RUS25710.1 994334 g1687 i0 55.9 4.8 68 30 88.7 0 226 23 111 178 RUS25710.1 S25 ribosomal protein-domain-containing protein [Jimgerdemannia flammicorona] diamond 1104 72.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Endogonomycetes Endogonales Endogonaceae Jimgerdemannia Jimgerdemannia flammicorona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;