RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA999747" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA999747 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27342827 27342827 PRJNA999747_S_NODE_2143_length_208_cov_3.694915_g2111_i0 PRJNA999747 2143 208 3.694915 7.6854232 Austropuccinia psidii 181123 Fungi Fungi 71.6 9.29e-14   NR MBW0462034.1 1389203 g2111 i0 64.2 6.47596153846154 53 19 76.4 0 3 161 64 116 MBW0462034.1 hypothetical protein [Austropuccinia psidii MF-1] diamond 1347 71.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Sphaerophragmiaceae Austropuccinia Austropuccinia psidii
31638265 31638265 PRJNA999747_S_NODE_3756_length_163_cov_2.045455_g3724_i0 PRJNA999747 3756 163 2.045455 3.33409165 Tilletiaria anomala UBC 951 1037660 Fungi Fungi 93.2 2.07e-20   NR XP_013244530.1 1037660 g3724 i0 82.7 4.78527607361963 52 9 95.7 0 160 5 175 226 XP_013244530.1 Myo-inositol-1-phosphate synthase [Tilletiaria anomala UBC 951] diamond 780 93.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Georgefischeriales Tilletiariaceae Tilletiaria Tilletiaria anomala
32144573 32144573 PRJNA999747_S_NODE_3078_length_178_cov_2.659864_g3046_i0 PRJNA999747 3078 178 2.659864 4.73455792 Malassezia arunalokei 1514897 Fungi Fungi 80.5 7.85e-16   NR WFD16437.1 1514897 g3046 i0 74.2 1.04494382022472 62 4 84.3 1 177 28 947 1008 WFD16437.1 hypothetical protein MARU1_002474 [Malassezia arunalokei] diamond 186 80.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia arunalokei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;