contig_metadata
39 rows where analysis = "diamond", bioproject = "PRJNA999043" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4807732 | 4807732 | PRJNA999043_P_NODE_21364_length_253_cov_1.066667_g21269_i0 | PRJNA999043 | 21364 | 253 | 1.066667 | 2.69866751 | Bacteria | 2 | Bacteria | Bacteria | 87.4 | 2.32e-18 | NR | WP_134627432.1 | 287 | g21269 | i0 | 62.2 | 9.72332015810277 | 82 | 31 | 97.2 | 0 | 252 | 7 | 228 | 309 | WP_134627432.1 hypothetical protein, partial [Pseudomonas aeruginosa] | diamond | 2460 | 87.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 26968999 | 26968999 | PRJNA999043_P_NODE_21422_length_252_cov_1.290503_g21327_i0 | PRJNA999043 | 21422 | 252 | 1.290503 | 3.25206756 | Escherichia | 561 | Bacteria | Bacteria | 80.1 | 2.98e-15 | NR | MCN7997256.1 | 562 | g21327 | i0 | 42.7 | 5.95238095238095 | 82 | 47 | 97.6 | 0 | 1 | 246 | 31 | 112 | MCN7997256.1 phage tail assembly protein T [Escherichia coli] | diamond | 1500 | 80.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27184411 | 27184411 | PRJNA999043_P_NODE_22462_length_248_cov_1.320000_g22367_i0 | PRJNA999043 | 22462 | 248 | 1.32 | 3.2736 | Escherichia coli | 562 | Bacteria | Bacteria | 61.2 | 1.41e-9 | NR | EIC3810448.1 | 562 | g22367 | i0 | 47.9 | 1.16129032258065 | 48 | 25 | 58.1 | 0 | 223 | 80 | 93 | 140 | EIC3810448.1 phage minor tail protein G [Escherichia coli] | diamond | 288 | 61.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27569465 | 27569465 | PRJNA999043_P_NODE_19084_length_283_cov_1.166667_g18989_i0 | PRJNA999043 | 19084 | 283 | 1.166667 | 3.30166761 | Bacteria | 2 | Bacteria | Bacteria | 100 | 1.74e-23 | NR | WP_353524578.1 | 562 | g18989 | i0 | 56.8 | 17.1731448763251 | 81 | 35 | 85.9 | 0 | 282 | 40 | 62 | 142 | WP_353524578.1 hypothetical protein, partial [Escherichia coli] | diamond | 4860 | 100 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27721971 | 27721971 | PRJNA999043_P_NODE_7704_length_625_cov_1.481884_g7615_i0 | PRJNA999043 | 7704 | 625 | 1.481884 | 9.261775 | Escherichia coli O145:H28 | 1078034 | Bacteria | Bacteria | 58.9 | 3.81e-7 | NR | GEG71699.1 | 1078034 | g7615 | i0 | 39.5 | 0.6768 | 76 | 46 | 36.5 | 0 | 618 | 391 | 2 | 77 | GEG71699.1 phage minor tail protein [Escherichia coli O145:H28] | diamond | 423 | 58.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28043130 | 28043130 | PRJNA999043_P_NODE_21265_length_254_cov_1.276243_g21170_i0 | PRJNA999043 | 21265 | 254 | 1.276243 | 3.24165722 | root | 1 | Root_unresolved | Root_unresolved | 84.3 | 3.24e-19 | NR | WP_244577423.1 | 562 | g21170 | i0 | 58.2 | 4.74803149606299 | 67 | 28 | 79.1 | 0 | 244 | 44 | 1 | 67 | WP_244577423.1 host-nuclease inhibitor Gam family protein, partial [Escherichia coli] | diamond | 1206 | 84.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28416303 | 28416303 | PRJNA999043_P_NODE_19786_length_273_cov_1.150000_g19691_i0 | PRJNA999043 | 19786 | 273 | 1.15 | 3.1395 | Escherichia coli | 562 | Bacteria | Bacteria | 74.3 | 4.02e-13 | NR | WP_373272248.1 | 562 | g19691 | i0 | 62.9 | 2.04395604395604 | 62 | 23 | 68.1 | 0 | 87 | 272 | 5 | 66 | WP_373272248.1 phage tail tape measure protein [Escherichia coli] | diamond | 558 | 74.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28447919 | 28447919 | PRJNA999043_P_NODE_13046_length_415_cov_1.043860_g12951_i0 | PRJNA999043 | 13046 | 415 | 1.04386 | 4.332019 | Escherichia coli | 562 | Bacteria | Bacteria | 51.2 | 2.06e-4 | NR | GCL11899.1 | 562 | g12951 | i0 | 58 | 1.44578313253012 | 50 | 21 | 36.1 | 0 | 151 | 2 | 68 | 117 | GCL11899.1 hypothetical protein BvCmsD61A_04662 [Escherichia coli] | diamond | 600 | 51.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28731947 | 28731947 | PRJNA999043_P_NODE_11947_length_448_cov_1.026667_g11853_i0 | PRJNA999043 | 11947 | 448 | 1.026667 | 4.59946816 | Escherichia coli | 562 | Bacteria | Bacteria | 68.6 | 2.79e-10 | NR | GCI90187.1 | 562 | g11853 | i0 | 58.6 | 0.388392857142857 | 58 | 24 | 38.8 | 0 | 149 | 322 | 332 | 389 | GCI90187.1 phage portal protein [Escherichia coli] | diamond | 174 | 68.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28737790 | 28737790 | PRJNA999043_P_NODE_8587_length_579_cov_1.956522_g8495_i0 | PRJNA999043 | 8587 | 579 | 1.956522 | 11.32826238 | root | 1 | Root_unresolved | Root_unresolved | 67 | 7.65e-11 | NR | WP_230794037.1 | 550 | g8495 | i0 | 68 | 2.83419689119171 | 50 | 16 | 25.9 | 0 | 283 | 432 | 47 | 96 | WP_230794037.1 phage holin, lambda family [Enterobacter cloacae] | diamond | 1641 | 67 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter cloacae | ||
| 29331785 | 29331785 | PRJNA999043_P_NODE_14729_length_370_cov_0.966330_g14634_i0 | PRJNA999043 | 14729 | 370 | 0.96633 | 3.575421 | Escherichia coli | 562 | Bacteria | Bacteria | 50.4 | 4.19e-5 | NR | WP_159141244.1 | 562 | g14634 | i0 | 41.8 | 2.22972972972973 | 55 | 32 | 44.6 | 0 | 274 | 110 | 39 | 93 | WP_159141244.1 phage portal protein, partial [Escherichia coli] | diamond | 825 | 50.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29678782 | 29678782 | PRJNA999043_P_NODE_18850_length_287_cov_0.864486_g18755_i0 | PRJNA999043 | 18850 | 287 | 0.864486 | 2.48107482 | Escherichia coli | 562 | Bacteria | Bacteria | 90.5 | 1.58e-20 | NR | WP_053903335.1 | 562 | g18755 | i0 | 70 | 0.731707317073171 | 70 | 21 | 73.2 | 0 | 6 | 215 | 89 | 158 | WP_053903335.1 YqaJ viral recombinase family protein, partial [Escherichia coli] | diamond | 210 | 90.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29779668 | 29779668 | PRJNA999043_P_NODE_18011_length_300_cov_1.356828_g17916_i0 | PRJNA999043 | 18011 | 300 | 1.356828 | 4.070484 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 60.5 | 2.01e-9 | NR | KUX81129.1 | 562 | g17916 | i0 | 55.6 | 1.08 | 54 | 24 | 54 | 0 | 137 | 298 | 7 | 60 | KUX81129.1 hypothetical protein AWF91_20990 [Escherichia coli] | diamond | 324 | 60.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29874488 | 29874488 | PRJNA999043_P_NODE_19091_length_283_cov_1.100000_g18996_i0 | PRJNA999043 | 19091 | 283 | 1.1 | 3.113 | Escherichia | 561 | Bacteria | Bacteria | 56.6 | 7.62e-8 | NR | STI77289.1 | 562 | g18996 | i0 | 52.9 | 2.69257950530035 | 51 | 24 | 54.1 | 0 | 280 | 128 | 57 | 107 | STI77289.1 host-nuclease inhibitor protein Gam [Escherichia coli] | diamond | 762 | 56.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30000941 | 30000941 | PRJNA999043_P_NODE_14991_length_363_cov_1.231034_g14896_i0 | PRJNA999043 | 14991 | 363 | 1.231034 | 4.46865342 | FCB group | 1783270 | Bacteria | Bacteria | 72.4 | 2.92e-13 | NR | WP_178380544.1 | 347 | g14896 | i0 | 73.1 | 11.603305785124 | 52 | 14 | 43 | 0 | 168 | 323 | 55 | 106 | WP_178380544.1 AAA family ATPase, partial [Xanthomonas oryzae] | diamond | 4212 | 72.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas oryzae | ||
| 30190245 | 30190245 | PRJNA999043_P_NODE_15192_length_358_cov_1.621053_g15097_i0 | PRJNA999043 | 15192 | 358 | 1.621053 | 5.80336974 | Bacteria | 2 | Bacteria | Bacteria | 106 | 2.95e-25 | NR | WP_143688368.1 | 347 | g15097 | i0 | 71.8 | 23.4050279329609 | 85 | 24 | 71.2 | 0 | 104 | 358 | 14 | 98 | WP_143688368.1 AAA family ATPase, partial [Xanthomonas oryzae] | diamond | 8379 | 106 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas oryzae | ||
| 30437535 | 30437535 | PRJNA999043_P_NODE_17133_length_316_cov_1.189300_g17038_i0 | PRJNA999043 | 17133 | 316 | 1.1893 | 3.758188 | Escherichia coli | 562 | Bacteria | Bacteria | 114 | 7.34e-27 | NR | GCX84775.1 | 562 | g17038 | i0 | 51 | 6.63607594936709 | 100 | 49 | 94.9 | 0 | 308 | 9 | 465 | 564 | GCX84775.1 hypothetical protein HmCmsJML066_03076 [Escherichia coli] | diamond | 2097 | 114 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30569222 | 30569222 | PRJNA999043_P_NODE_3533_length_1027_cov_1.253669_g3477_i0 | PRJNA999043 | 3533 | 1027 | 1.253669 | 12.87518063 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 112 | 1.7700000000000002e-26 | NR | WP_411901376.1 | 562 | g3477 | i0 | 65.3 | 4.16260954235638 | 95 | 33 | 27.8 | 0 | 418 | 134 | 12 | 106 | WP_411901376.1 tail fiber assembly protein, partial [Escherichia coli] | diamond | 4275 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30721503 | 30721503 | PRJNA999043_P_NODE_20054_length_269_cov_1.178571_g19959_i0 | PRJNA999043 | 20054 | 269 | 1.178571 | 3.17035599 | Escherichia coli | 562 | Bacteria | Bacteria | 62.4 | 1.05e-9 | NR | WP_109821360.1 | 562 | g19959 | i0 | 39.5 | 4.78438661710037 | 86 | 52 | 95.9 | 0 | 268 | 11 | 48 | 133 | WP_109821360.1 tail fiber assembly protein, partial [Escherichia coli] | diamond | 1287 | 62.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30816394 | 30816394 | PRJNA999043_P_NODE_10514_length_496_cov_1.609929_g10421_i0 | PRJNA999043 | 10514 | 496 | 1.609929 | 7.98524784 | Escherichia coli | 562 | Bacteria | Bacteria | 75.5 | 7.42e-13 | NR | WP_252371379.1 | 562 | g10421 | i0 | 61.3 | 4.02822580645161 | 111 | 43 | 67.1 | 0 | 119 | 451 | 171 | 281 | WP_252371379.1 phage tail protein, partial [Escherichia coli] | diamond | 1998 | 75.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30911330 | 30911330 | PRJNA999043_P_NODE_13934_length_390_cov_1.173502_g13839_i0 | PRJNA999043 | 13934 | 390 | 1.173502 | 4.5766578000000004 | Escherichia coli | 562 | Bacteria | Bacteria | 79.7 | 2.23e-15 | NR | SQN87684.1 | 562 | g13839 | i0 | 55.9 | 0.453846153846154 | 59 | 26 | 45.4 | 0 | 200 | 24 | 119 | 177 | SQN87684.1 tail fiber protein [Escherichia coli] | diamond | 177 | 79.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 31005958 | 31005958 | PRJNA999043_P_NODE_22854_length_247_cov_0.885057_g22759_i0 | PRJNA999043 | 22854 | 247 | 0.885057 | 2.18609079 | Escherichia coli | 562 | Bacteria | Bacteria | 46.6 | 0.00104 | NR | EIN2321067.1 | 562 | g22759 | i0 | 60 | 79.3481781376518 | 35 | 14 | 42.5 | 0 | 107 | 3 | 90 | 124 | EIN2321067.1 YqaJ viral recombinase family protein [Escherichia coli] | diamond | 19599 | 46.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 31011810 | 31011810 | PRJNA999043_P_NODE_12474_length_432_cov_1.103064_g12380_i0 | PRJNA999043 | 12474 | 432 | 1.103064 | 4.76523648 | Escherichia | 561 | Bacteria | Bacteria | 64.7 | 6.96e-11 | NR | WP_348919572.1 | 562 | g12380 | i0 | 68.3 | 0.854166666666667 | 41 | 13 | 28.5 | 0 | 244 | 122 | 16 | 56 | WP_348919572.1 hypothetical protein, partial [Escherichia coli] | diamond | 369 | 64.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 31037897 | 31037897 | PRJNA999043_P_NODE_7095_length_665_cov_1.679054_g7006_i0 | PRJNA999043 | 7095 | 665 | 1.679054 | 11.1657091 | Shigella sonnei | 624 | Bacteria | Bacteria | 126 | 1.78e-32 | NR | CSF42818.1 | 624 | g7006 | i0 | 56.8 | 0.532330827067669 | 118 | 51 | 53.2 | 0 | 358 | 5 | 19 | 136 | CSF42818.1 Uncharacterised protein [Shigella sonnei] | diamond | 354 | 126 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Shigella | Shigella sonnei | ||
| 31137926 | 31137926 | PRJNA999043_P_NODE_20455_length_264_cov_0.968586_g20360_i0 | PRJNA999043 | 20455 | 264 | 0.968586 | 2.55706704 | root | 1 | Root_unresolved | Root_unresolved | 124 | 2.56e-33 | NR | HCL4234111.1 | 287 | g20360 | i0 | 77.8 | 790.602272727273 | 81 | 18 | 92 | 0 | 3 | 245 | 61 | 141 | HCL4234111.1 DUF1983 domain-containing protein [Pseudomonas aeruginosa] | diamond | 208719 | 124 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 31227039 | 31227039 | PRJNA999043_P_NODE_13615_length_399_cov_1.236196_g13520_i0 | PRJNA999043 | 13615 | 399 | 1.236196 | 4.93242204 | Escherichia coli | 562 | Bacteria | Bacteria | 47 | 4.5e-4 | NR | WP_077780256.1 | 562 | g13520 | i0 | 43.9 | 12.4285714285714 | 57 | 32 | 42.9 | 0 | 218 | 48 | 12 | 68 | WP_077780256.1 phage minor tail protein L, partial [Escherichia coli] | diamond | 4959 | 47 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 31321995 | 31321995 | PRJNA999043_P_NODE_9515_length_539_cov_1.240343_g9423_i0 | PRJNA999043 | 9515 | 539 | 1.240343 | 6.68544877 | Escherichia coli | 562 | Bacteria | Bacteria | 58.2 | 1.45e-7 | NR | EID6493395.1 | 562 | g9423 | i0 | 56.3 | 1.06307977736549 | 48 | 21 | 26.7 | 0 | 471 | 328 | 1 | 48 | EID6493395.1 head decoration protein [Escherichia coli] | diamond | 573 | 58.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 31353724 | 31353724 | PRJNA999043_P_NODE_24516_length_242_cov_0.911243_g24421_i0 | PRJNA999043 | 24516 | 242 | 0.911243 | 2.20520806 | Betaproteobacteria bacterium | 1891241 | Bacteria | Bacteria | 122 | 6.37e-34 | NR | MFN5156348.1 | 1891241 | g24421 | i0 | 98.3 | 1.43801652892562 | 58 | 1 | 71.9 | 0 | 241 | 68 | 62 | 119 | MFN5156348.1 SCP2 domain-containing protein [Betaproteobacteria bacterium] | diamond | 348 | 122 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Betaproteobacteria bacterium | |||||
| 31359708 | 31359708 | PRJNA999043_P_NODE_20656_length_261_cov_1.228723_g20561_i0 | PRJNA999043 | 20656 | 261 | 1.228723 | 3.20696703 | root | 1 | Root_unresolved | Root_unresolved | 66.6 | 2.36e-11 | NR | MDC4463210.1 | 470 | g20561 | i0 | 82.9 | 13.6666666666667 | 41 | 7 | 47.1 | 0 | 41 | 163 | 67 | 107 | MDC4463210.1 hypothetical protein [Acinetobacter baumannii] | diamond | 3567 | 66.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 31891399 | 31891399 | PRJNA999043_P_NODE_20497_length_263_cov_1.268421_g20402_i0 | PRJNA999043 | 20497 | 263 | 1.268421 | 3.33594723 | Escherichia coli | 562 | Bacteria | Bacteria | 65.1 | 7.8e-11 | NR | WP_309209583.1 | 562 | g20402 | i0 | 41.8 | 96.4220532319392 | 79 | 46 | 90.1 | 0 | 25 | 261 | 47 | 125 | WP_309209583.1 terminase small subunit, partial [Escherichia coli] | diamond | 25359 | 65.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32049561 | 32049561 | PRJNA999043_P_NODE_22758_length_247_cov_1.477011_g22663_i0 | PRJNA999043 | 22758 | 247 | 1.477011 | 3.64821717 | Escherichia coli O145:H25 str. | 1446582 | Bacteria | Bacteria | 61.2 | 2.63e-10 | NR | KDV43251.1 | 1446583 | g22663 | i0 | 56.9 | 0.619433198380567 | 51 | 22 | 61.9 | 0 | 8 | 160 | 18 | 68 | KDV43251.1 hypothetical protein BU56_34405 [Escherichia coli O145:H25 str. 07-3858] | diamond | 153 | 61.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32271226 | 32271226 | PRJNA999043_P_NODE_20978_length_257_cov_1.255435_g20883_i0 | PRJNA999043 | 20978 | 257 | 1.255435 | 3.22646795 | Escherichia coli | 562 | Bacteria | Bacteria | 52.4 | 3.46e-6 | NR | WP_407222714.1 | 562 | g20883 | i0 | 41.9 | 0.723735408560311 | 62 | 36 | 72.4 | 0 | 257 | 72 | 59 | 120 | WP_407222714.1 DUF2528 family protein [Escherichia coli] | diamond | 186 | 52.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32277173 | 32277173 | PRJNA999043_P_NODE_16198_length_335_cov_1.164122_g16103_i0 | PRJNA999043 | 16198 | 335 | 1.164122 | 3.8998087 | Escherichia | 561 | Bacteria | Bacteria | 61.2 | 1.26e-9 | NR | WP_001648094.1 | 562 | g16103 | i0 | 50.8 | 28.4059701492537 | 61 | 30 | 54.6 | 0 | 40 | 222 | 1 | 61 | WP_001648094.1 replication protein, partial [Escherichia coli] | diamond | 9516 | 61.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32618872 | 32618872 | PRJNA999043_P_NODE_14440_length_377_cov_1.138158_g14345_i0 | PRJNA999043 | 14440 | 377 | 1.138158 | 4.29085566 | Escherichia coli | 562 | Bacteria | Bacteria | 70.1 | 4.28e-12 | NR | WP_097499688.1 | 562 | g14345 | i0 | 51.7 | 0.477453580901857 | 60 | 29 | 47.7 | 0 | 180 | 1 | 47 | 106 | WP_097499688.1 major capsid protein, partial [Escherichia coli] | diamond | 180 | 70.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32650057 | 32650057 | PRJNA999043_P_NODE_7640_length_629_cov_1.032374_g7551_i0 | PRJNA999043 | 7640 | 629 | 1.032374 | 6.49363246 | Escherichia coli | 562 | Bacteria | Bacteria | 162 | 2.5999999999999997e-47 | NR | CTW60537.1 | 562 | g7551 | i0 | 58.1 | 0.615262321144674 | 129 | 54 | 61.5 | 0 | 413 | 27 | 2 | 130 | CTW60537.1 Uncharacterised protein [Escherichia coli] | diamond | 387 | 162 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32681591 | 32681591 | PRJNA999043_P_NODE_18800_length_287_cov_1.518692_g18705_i0 | PRJNA999043 | 18800 | 287 | 1.518692 | 4.35864604 | Vibrio parahaemolyticus | 670 | Bacteria | Bacteria | 112 | 1.63e-29 | NR | KKZ02321.1 | 670 | g18705 | i0 | 53.7 | 1.98606271777003 | 95 | 44 | 99.3 | 0 | 3 | 287 | 7 | 101 | KKZ02321.1 hypothetical protein YC68_24590, partial [Vibrio parahaemolyticus] | diamond | 570 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio parahaemolyticus | ||
| 32719184 | 32719184 | PRJNA999043_P_NODE_8940_length_564_cov_0.940937_g8848_i0 | PRJNA999043 | 8940 | 564 | 0.940937 | 5.30688468 | Bacteria | 2 | Bacteria | Bacteria | 121 | 8.04e-31 | NR | WP_075252857.1 | 347 | g8848 | i0 | 54.6 | 3.79255319148936 | 119 | 54 | 63.3 | 0 | 359 | 3 | 1 | 119 | WP_075252857.1 protein rexA, partial [Xanthomonas oryzae] | diamond | 2139 | 121 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas oryzae | ||
| 32776237 | 32776237 | PRJNA999043_P_NODE_12020_length_446_cov_1.134048_g11926_i0 | PRJNA999043 | 12020 | 446 | 1.134048 | 5.05785408 | Shigella sonnei | 624 | Bacteria | Bacteria | 96.7 | 4.45e-22 | NR | CSV04774.1 | 624 | g11926 | i0 | 57 | 0.57847533632287 | 86 | 37 | 57.8 | 0 | 129 | 386 | 11 | 96 | CSV04774.1 Uncharacterised protein [Shigella sonnei] | diamond | 258 | 96.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Shigella | Shigella sonnei | ||
| 32902145 | 32902145 | PRJNA999043_P_NODE_6160_length_732_cov_1.403642_g6074_i0 | PRJNA999043 | 6160 | 732 | 1.403642 | 10.27465944 | Escherichia coli | 562 | Bacteria | Bacteria | 133 | 4.05e-34 | NR | WP_235784052.1 | 562 | g6074 | i0 | 58.8 | 10.7459016393443 | 114 | 47 | 46.7 | 0 | 661 | 320 | 110 | 223 | WP_235784052.1 tyrosine-type recombinase/integrase, partial [Escherichia coli] | diamond | 7866 | 133 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;