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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA994052" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 25 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA994052 · 25 ✖

analysis 1

  • diamond · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
976894 976894 PRJNA994052_P_NODE_83441_length_197_cov_9.790323_g82184_i0 PRJNA994052 83441 197 9.790323 19.28693631 Nyssa sinensis 561372 Plants Plants 78.2 6.57e-15   NR KAA8539484.1 561372 g82184 i0 51.6 3.77664974619289 62 30 94.4 0 9 194 844 905 KAA8539484.1 hypothetical protein F0562_026176 [Nyssa sinensis] diamond 744 78.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cornales Nyssaceae Nyssa Nyssa sinensis
26652241 26652241 PRJNA994052_P_NODE_67081_length_216_cov_31.279720_g65825_i0 PRJNA994052 67081 216 31.27972 67.5641952 Streptophyta 35493 Plants Plants 92.8 6.420000000000001e-21   NR XP_024358400.1 3218 g65825 i0 76.5 9.44444444444444 68 12 94.4 2 206 3 6 69 XP_024358400.1 ribonuclease P protein subunit p25-like protein [Physcomitrium patens] diamond 2040 93.6 0.991452991452991 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Funariales Funariaceae Physcomitrium Physcomitrium patens
27279461 27279461 PRJNA994052_P_NODE_79623_length_201_cov_21.500000_g78366_i0 PRJNA994052 79623 201 21.5 43.215 Stylosanthes scabra 79078 Plants Plants 96.3 8.14e-24   NR MED6214258.1 79078 g78366 i0 94.1 0.761194029850746 51 3 76.1 0 154 2 59 109 MED6214258.1 hypothetical protein [Stylosanthes scabra] diamond 153 96.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Stylosanthes Stylosanthes scabra
27563343 27563343 PRJNA994052_P_NODE_31504_length_278_cov_8.658537_g30260_i0 PRJNA994052 31504 278 8.658537 24.07073286 Malus baccata 106549 Plants Plants 42.7 0.0404   NR TQD84541.1 106549 g30260 i0 44.2 0.464028776978417 43 23 46.4 1 42 170 151 192 TQD84541.1 hypothetical protein C1H46_029884 [Malus baccata] diamond 129 42.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Malus Malus baccata
27784854 27784854 PRJNA994052_P_NODE_22464_length_302_cov_103.524017_g21235_i0 PRJNA994052 22464 302 103.524017 312.64253134 Camelina sativa 90675 Plants Plants 43.5 0.0378   NR XP_019096290.1 90675 g21235 i0 38.8 0.665562913907285 67 38 66.6 1 62 262 70 133 XP_019096290.1 PREDICTED: transcription factor TCP18-like isoform X2 [Camelina sativa] diamond 201 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Camelina Camelina sativa
28132117 28132117 PRJNA994052_P_NODE_63125_length_221_cov_81.912162_g61869_i0 PRJNA994052 63125 221 81.912162 181.02587802 Hibiscus sabdariffa 183260 Plants Plants 63.5 1.3e-9   NR KAK9029066.1 183260 g61869 i0 58.1 8.97285067873303 43 18 58.4 0 211 83 784 826 KAK9029066.1 hypothetical protein V6N11_026189 [Hibiscus sabdariffa] diamond 1983 63.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Hibiscus Hibiscus sabdariffa
28573923 28573923 PRJNA994052_P_NODE_30947_length_279_cov_33.373786_g29703_i0 PRJNA994052 30947 279 33.373786 93.11286294 Solanum tuberosum 4113 Plants Plants 52 3.21e-5   NR KAH0771959.1 4113 g29703 i0 31.6 1.40860215053763 79 50 80.6 2 274 50 89 167 KAH0771959.1 hypothetical protein KY290_015940 [Solanum tuberosum] diamond 393 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum tuberosum
28921150 28921150 PRJNA994052_P_NODE_67688_length_215_cov_65.359155_g66432_i0 PRJNA994052 67688 215 65.359155 140.52218325 Cinnamomum micranthum f. kanehirae 337451 Plants Plants 62 1.8e-9   NR RWR85244.1 337451 g66432 i0 96.4 0.390697674418605 28 1 39.1 0 215 132 198 225 RWR85244.1 NDR1/HIN1-Like protein 3-like protein [Cinnamomum micranthum f. kanehirae] diamond 84 62 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Laurales Lauraceae Cinnamomum Cinnamomum micranthum
29047717 29047717 PRJNA994052_P_NODE_13708_length_315_cov_17.272727_g12487_i0 PRJNA994052 13708 315 17.272727 54.40909005 Bauhinia variegata 167791 Plants Plants 80.5 2.43e-15   NR KAI4333518.1 167791 g12487 i0 47.5 1.92380952380952 99 40 82.9 1 2 262 233 331 KAI4333518.1 hypothetical protein L6164_018312 [Bauhinia variegata] diamond 606 80.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Bauhinia Bauhinia variegata
29300217 29300217 PRJNA994052_P_NODE_78509_length_202_cov_48.860465_g77252_i0 PRJNA994052 78509 202 48.860465 98.6981393 Solanum commersonii 4109 Plants Plants 53.9 2.52e-6   NR KAG5614778.1 4109 g77252 i0 44.8 2.16831683168317 58 32 86.1 0 189 16 523 580 KAG5614778.1 hypothetical protein H5410_014602 [Solanum commersonii] diamond 438 53.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum commersonii
29615609 29615609 PRJNA994052_P_NODE_70170_length_212_cov_37.748201_g68914_i0 PRJNA994052 70170 212 37.748201 80.02618612 Vigna radiata var. radiata 3916 Plants Plants 68.2 6.36e-13   NR XP_014508110.1 3916 g68914 i0 55.2 3.07075471698113 58 18 70.8 1 20 169 38 95 XP_014508110.1 10 kDa chaperonin, mitochondrial [Vigna radiata var. radiata] diamond 651 68.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Vigna Vigna radiata
29710293 29710293 PRJNA994052_P_NODE_17450_length_312_cov_4.937238_g16229_i0 PRJNA994052 17450 312 4.937238 15.40418256 Anisodus tanguticus 243964 Plants Plants 73.2 1.68e-12   NR KAK4337274.1 243964 g16229 i0 68 6.70192307692308 50 16 48.1 0 162 311 563 612 KAK4337274.1 hypothetical protein RND71_043272 [Anisodus tanguticus] diamond 2091 73.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Anisodus Anisodus tanguticus
30215906 30215906 PRJNA994052_P_NODE_66292_length_217_cov_38.173611_g65036_i0 PRJNA994052 66292 217 38.173611 82.83673587 Klebsormidium nitens 105231 Plants Plants 55.8 6.39e-7   NR GAQ82529.1 105231 g65036 i0 45.9 2.0184331797235 74 34 95.4 4 211 5 468 540 GAQ82529.1 hypothetical protein KFL_001140170 [Klebsormidium nitens] diamond 438 55.8 1 Eukaryota   Viridiplantae Streptophyta Klebsormidiophyceae Klebsormidiales Klebsormidiaceae Klebsormidium Klebsormidium nitens
30406042 30406042 PRJNA994052_P_NODE_21193_length_306_cov_37.412017_g19966_i0 PRJNA994052 21193 306 37.412017 114.48077202 Oryza sativa Japonica Group 39947 Plants Plants 54.3 6.55e-6   NR EEE59534.1 39947 g19966 i0 40.8 0.96078431372549 49 28 47.1 1 158 15 181 229 EEE59534.1 hypothetical protein OsJ_11799 [Oryza sativa Japonica Group] diamond 294 54.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
30942916 30942916 PRJNA994052_P_NODE_49954_length_241_cov_37.214286_g48700_i0 PRJNA994052 49954 241 37.214286 89.68642926 Solanum tuberosum 4113 Plants Plants 52 1.93e-5   NR KAH0765374.1 4113 g48700 i0 52.1 0.597510373443983 48 23 59.8 0 51 194 192 239 KAH0765374.1 hypothetical protein KY285_001245 [Solanum tuberosum] diamond 144 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum tuberosum
31100599 31100599 PRJNA994052_P_NODE_49915_length_241_cov_46.690476_g48661_i0 PRJNA994052 49915 241 46.690476 112.52404716 Hordeum vulgare subsp. vulgare 112509 Plants Plants 62 5.88e-9   NR BAJ93773.1 112509 g48661 i0 75.7 0.460580912863071 37 9 46.1 0 238 128 521 557 BAJ93773.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 111 62 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
31163644 31163644 PRJNA994052_P_NODE_42575_length_254_cov_2.729282_g41328_i0 PRJNA994052 42575 254 2.729282 6.93237628 Triticum turgidum subsp. durum 4567 Plants Plants 64.7 3.12e-10   NR VAH14583.1 4567 g41328 i0 57.1 3.68503937007874 56 23 65 1 247 83 176 231 VAH14583.1 unnamed protein product [Triticum turgidum subsp. durum] diamond 936 64.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum turgidum
31327855 31327855 PRJNA994052_P_NODE_19235_length_310_cov_35.303797_g18012_i0 PRJNA994052 19235 310 35.303797 109.4417707 Magnoliopsida 3398 Plants Plants 64.3 2.1e-9   NR KAH9603189.1 39905 g18012 i0 51.4 4.41290322580645 72 26 61 2 5 193 7 78 KAH9603189.1 hypothetical protein KSS87_021909 [Heliosperma pusillum] diamond 1368 64.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Caryophyllaceae Heliosperma Heliosperma pusillum
31327858 31327858 PRJNA994052_P_NODE_66615_length_217_cov_6.868056_g65359_i0 PRJNA994052 66615 217 6.868056 14.90368152 Eukaryota 2759 Plants Plants 59.3 3.44e-8   NR KAG9146763.1 34254 g65359 i0 58.2 8.6405529953917 55 23 76 0 51 215 117 171 KAG9146763.1 hypothetical protein Leryth_005085 [Lithospermum erythrorhizon] diamond 1875 59.7 0.993299832495812 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Boraginales Boraginaceae Lithospermum Lithospermum erythrorhizon
31391300 31391300 PRJNA994052_P_NODE_33716_length_272_cov_35.226131_g32472_i0 PRJNA994052 33716 272 35.226131 95.81507632 Magnoliopsida 3398 Plants Plants 75.5 1.03e-13   NR KAI3734209.1 4217 g32472 i0 55.4 28.5441176470588 74 8 81.6 1 224 3 187 235 KAI3734209.1 hypothetical protein L6452_13673 [Arctium lappa] diamond 7764 75.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Arctium Arctium lappa
31422798 31422798 PRJNA994052_P_NODE_70136_length_212_cov_42.611511_g68880_i0 PRJNA994052 70136 212 42.611511 90.33640332 root 1 Root_unresolved Root_unresolved 47 7.23e-4   NR KAL3680677.1 122646 g68880 i0 42.9 5.88679245283019 70 33 89.2 2 211 23 171 240 KAL3680677.1 hypothetical protein R1sor_023633 [Riccia sorocarpa] diamond 1248 47.4 0.991561181434599 Eukaryota Embryophyta Viridiplantae Streptophyta Marchantiopsida Marchantiales Ricciaceae Riccia Riccia sorocarpa
31644046 31644046 PRJNA994052_P_NODE_60456_length_225_cov_43.671053_g59200_i0 PRJNA994052 60456 225 43.671053 98.25986925 Rosales 3744 Plants Plants 61.6 3.01e-10   NR PON58107.1 3476 g59200 i0 68.5 1.44 54 11 72 1 9 170 53 100 PON58107.1 hypothetical protein PanWU01x14_168770 [Parasponia andersonii] diamond 324 62 0.993548387096774 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Parasponia Parasponia andersonii
31833823 31833823 PRJNA994052_P_NODE_35497_length_268_cov_31.025641_g34251_i0 PRJNA994052 35497 268 31.025641 83.14871788 Poales 38820 Plants Plants 52.8 1.47e-5   NR KAJ3680304.1 13579 g34251 i0 39.3 2.40671641791045 56 32 60.4 1 8 169 415 470 KAJ3680304.1 hypothetical protein LUZ60_016582 [Juncus effusus] diamond 645 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Juncaceae Juncus Juncus effusus
32498633 32498633 PRJNA994052_P_NODE_10899_length_331_cov_80.728682_g9686_i0 PRJNA994052 10899 331 80.728682 267.21193742 Eukaryota 2759 Plants Plants 73.2 2.07e-12   NR KAH9603189.1 39905 g9686 i0 52.6 3.70694864048338 78 36 69.8 1 5 235 7 84 KAH9603189.1 hypothetical protein KSS87_021909 [Heliosperma pusillum] diamond 1227 73.6 0.994565217391304 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Caryophyllaceae Heliosperma Heliosperma pusillum
32618846 32618846 PRJNA994052_P_NODE_68860_length_214_cov_8.843972_g67604_i0 PRJNA994052 68860 214 8.843972 18.92610008 Triticum aestivum 4565 Plants Plants 77.8 2.94e-16   NR XBI40238.1 4565 g67604 i0 76.4 0.771028037383178 55 11 77.1 1 168 4 41 93 XBI40238.1 hypothetical protein VPH35_124854 [Triticum aestivum] diamond 165 77.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;