RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA994052" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 4 ✖

bioproject 1

  • PRJNA994052 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27152450 27152450 PRJNA994052_P_NODE_15762_length_312_cov_30.008368_g14541_i0 PRJNA994052 15762 312 30.008368 93.62610816 Cressdnaviricota sp. 2748378 Viruses Viruses 45.1 0.00897   NR UOF83112.1 2748378 g14541 i0 44.7 0.451923076923077 47 26 45.2 0 142 2 108 154 UOF83112.1 capsid protein [Cressdnaviricota sp.] diamond 141 45.1 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
28637358 28637358 PRJNA994052_P_NODE_40927_length_257_cov_5.380435_g39680_i0 PRJNA994052 40927 257 5.380435 13.82771795 Genomoviridae sp. 2202565 Viruses Viruses 77 1.81e-14   NR WCD56370.1 2202565 g39680 i0 55.9 1.08560311284047 93 23 95.7 2 10 255 11 96 WCD56370.1 MAG: capsid protein [Genomoviridae sp.] diamond 279 77 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
29300208 29300208 PRJNA994052_P_NODE_32169_length_276_cov_19.950739_g30925_i0 PRJNA994052 32169 276 19.950739 55.06403964 Parvo-like hybrid virus UC4 1395615 Viruses Viruses 152 2.5899999999999998e-42   NR QJI53854.1 1395615 g30925 i0 75.8 0.989130434782609 91 22 98.9 0 274 2 296 386 QJI53854.1 MAG: replication protein [Parvo-like hybrid virus UC4] diamond 273 152 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Lineavirales Oomyviridae Nicoomyvirus Nicoomyvirus moldensis
32807736 32807736 PRJNA994052_P_NODE_76000_length_205_cov_33.378788_g74744_i0 PRJNA994052 76000 205 33.378788 68.4265154 Cressdnaviricota sp. 2748378 Viruses Viruses 67 4.4e-11   NR UOF82684.1 2748378 g74744 i0 73 0.541463414634146 37 10 54.1 0 64 174 107 143 UOF82684.1 capsid protein [Cressdnaviricota sp.] diamond 111 67 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;