RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA994052" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA994052 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28510862 28510862 PRJNA994052_P_NODE_72787_length_209_cov_16.536765_g71531_i0 PRJNA994052 72787 209 16.536765 34.56183885 Methanoculleus sp. 90427 Archaea Archaea 114 4.01e-28   NR WP_292561231.1 90427 g71531 i0 76.9 0.933014354066986 65 15 93.3 0 2 196 178 242 WP_292561231.1 PBSX family phage terminase large subunit [Methanoculleus sp.] diamond 195 114 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
32239689 32239689 PRJNA994052_P_NODE_78938_length_202_cov_9.038760_g77681_i0 PRJNA994052 78938 202 9.03876 18.2582952 Halomarina salina 1872699 Archaea Archaea 55.8 1.36e-7   NR WP_247415064.1 1872699 g77681 i0 62.2 0.668316831683168 45 13 60.9 2 127 5 1 45 WP_247415064.1 hypothetical protein [Halomarina salina] diamond 135 55.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halomarina Halomarina salina
32902107 32902107 PRJNA994052_P_NODE_64400_length_220_cov_4.884354_g63144_i0 PRJNA994052 64400 220 4.884354 10.7455788 Natronobeatus ordinarius 2963433 Archaea Archaea 42 0.0482   NR WP_255191692.1 2963433 g63144 i0 50 0.381818181818182 28 14 38.2 0 101 18 193 220 WP_255191692.1 esterase/lipase family protein [Natronobeatus ordinarius] diamond 84 42 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronobeatus Natronobeatus ordinarius

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;