RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA994052" and tax_clade = "Amoebozoa"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Amoebozoa · 9 ✖

bioproject 1

  • PRJNA994052 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26741189 26741189 PRJNA994052_P_NODE_55421_length_233_cov_2.787500_g54166_i0 PRJNA994052 55421 233 2.7875 6.494875 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 84 9.16e-17   NR PRP87109.1 1890364 g54166 i0 53.1 3.12875536480687 64 30 82.4 0 192 1 4 67 PRP87109.1 peptidase M20 [Planoprotostelium fungivorum] diamond 729 84 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26931576 26931576 PRJNA994052_P_NODE_21402_length_306_cov_4.738197_g20175_i0 PRJNA994052 21402 306 4.738197 14.49888282 Physarum polycephalum 5791 Evosea other_Eukaryota 66.6 6.8e-12   NR AEF68171.1 5791 g20175 i0 88.2 0.333333333333333 34 4 33.3 0 143 42 57 90 AEF68171.1 Sm-E-like protein [Physarum polycephalum] diamond 102 66.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
28258093 28258093 PRJNA994052_P_NODE_69526_length_213_cov_15.914286_g68270_i0 PRJNA994052 69526 213 15.914286 33.89742918 Dictyostelium purpureum 5786 Evosea other_Eukaryota 52 1.42e-6   NR XP_003293203.1 5786 g68270 i0 63.2 0.535211267605634 38 14 53.5 0 187 74 59 96 XP_003293203.1 uncharacterized protein DICPUDRAFT_93002 [Dictyostelium purpureum] diamond 114 52 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28384515 28384515 PRJNA994052_P_NODE_57386_length_230_cov_6.503185_g56131_i0 PRJNA994052 57386 230 6.503185 14.9573255 Dictyostelium purpureum 5786 Evosea other_Eukaryota 55.8 7.32e-7   NR XP_003290152.1 5786 g56131 i0 70.3 0.952173913043478 37 11 48.3 0 183 73 371 407 XP_003290152.1 uncharacterized protein DICPUDRAFT_154640 [Dictyostelium purpureum] diamond 219 55.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28731924 28731924 PRJNA994052_P_NODE_78087_length_203_cov_6.376923_g76830_i0 PRJNA994052 78087 203 6.376923 12.94515369 Cavenderia fasciculata 261658 Evosea other_Eukaryota 61.6 4.08e-9   NR XP_004351803.1 261658 g76830 i0 79.1 0.635467980295567 43 9 63.5 0 3 131 278 320 XP_004351803.1 succinate-CoA ligase [Cavenderia fasciculata] diamond 129 61.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
29331754 29331754 PRJNA994052_P_NODE_22569_length_302_cov_21.240175_g21340_i0 PRJNA994052 22569 302 21.240175 64.1453285 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 55.5 2.55e-6   NR XP_012752247.1 1410327 g21340 i0 29.3 1.1523178807947 116 53 86.4 1 301 41 321 436 XP_012752247.1 hypothetical protein SAMD00019534_077530 [Acytostelium subglobosum LB1] diamond 348 55.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
31986161 31986161 PRJNA994052_P_NODE_24878_length_295_cov_17.968468_g23642_i0 PRJNA994052 24878 295 17.968468 53.0069806 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 95.9 5.22e-21   NR KYR00559.1 361077 g23642 i0 49.1 1.07796610169492 106 29 86.4 2 5 259 265 366 KYR00559.1 transmembrane protein [Tieghemostelium lacteum] diamond 318 95.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32144538 32144538 PRJNA994052_P_NODE_60398_length_225_cov_55.868421_g59142_i0 PRJNA994052 60398 225 55.868421 125.70394725 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 58.2 1.05e-7   NR PRP74799.1 1890364 g59142 i0 70.5 0.586666666666667 44 13 58.7 0 205 74 472 515 PRP74799.1 actin binding protein [Planoprotostelium fungivorum] diamond 132 58.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32397783 32397783 PRJNA994052_P_NODE_23159_length_300_cov_28.211454_g21930_i0 PRJNA994052 23159 300 28.211454 84.634362 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 55.1 3.37e-6   NR XP_012752247.1 1410327 g21930 i0 29.3 1.16 116 54 88 1 2 265 321 436 XP_012752247.1 hypothetical protein SAMD00019534_077530 [Acytostelium subglobosum LB1] diamond 348 55.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;