RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA993416" and tax_phylum = "Candidatus Woeseibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA993416 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27247721 27247721 PRJNA993416_P_NODE_16303_length_241_cov_0.916667_g16198_i0 PRJNA993416 16303 241 0.916667 2.20916747 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 66.6 8.41e-12   NR MAG59485.1 2026804 g16198 i0 47.9 0.908713692946058 73 36 90.9 1 18 236 33 103 MAG59485.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 219 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
27317020 27317020 PRJNA993416_P_NODE_1463_length_699_cov_1.118211_g1366_i0 PRJNA993416 1463 699 1.118211 7.81629489 Bacteria 2 Bacteria Bacteria 124 2.85e-30   NR MBP6933268.1 2026804 g1366 i0 50.4 3.10300429184549 117 58 50.2 0 361 11 2 118 MBP6933268.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Candidatus Woesebacteria bacterium] diamond 2169 124 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
27879366 27879366 PRJNA993416_P_NODE_6365_length_330_cov_1.797665_g6260_i0 PRJNA993416 6365 330 1.797665 5.9322945 Candidatus Woesebacteria bacterium GW2 2026804 Bacteria Bacteria 46.6 7.6e-4   NR KKR00226.1 1618574 g6260 i0 40.9 0.845454545454545 93 53 84.5 2 289 11 5 95 KKR00226.1 MAG: hypothetical protein UT24_C0015G0034 [Candidatus Woesebacteria bacterium GW2011_GWB1_39_12] diamond 279 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWB1_39_12
28132093 28132093 PRJNA993416_P_NODE_12065_length_254_cov_1.077348_g11960_i0 PRJNA993416 12065 254 1.077348 2.73646392 Candidatus Woesebacteria bacterium GW2 2026804 Bacteria Bacteria 107 4.48e-26   NR KKQ99970.1 1618574 g11960 i0 60.7 0.992125984251969 84 27 99.2 2 1 252 111 188 KKQ99970.1 MAG: Alanyl-tRNA synthetase [Candidatus Woesebacteria bacterium GW2011_GWB1_39_12] diamond 252 107 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWB1_39_12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;