RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA993416" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA993416 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28984712 28984712 PRJNA993416_P_NODE_8928_length_283_cov_2.071429_g8823_i0 PRJNA993416 8928 283 2.071429 5.86214407 Rhizoctonia solani 456999 Fungi Fungi 45.4 0.00672   NR KAH7334455.1 456999 g8823 i0 34.4 0.646643109540636 61 40 64.7 0 79 261 64 124 KAH7334455.1 hypothetical protein B0J17DRAFT_108148 [Rhizoctonia solani] diamond 183 45.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Rhizoctonia Rhizoctonia solani
30626636 30626636 PRJNA993416_P_NODE_13153_length_249_cov_0.875000_g13048_i0 PRJNA993416 13153 249 0.875 2.17875 Acaromyces ingoldii 215250 Fungi Fungi 42.7 0.0351   NR XP_025381164.1 215250 g13048 i0 62.9 0.421686746987952 35 12 42.2 1 227 123 47 80 XP_025381164.1 thioredoxin-like protein [Acaromyces ingoldii] diamond 105 42.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Exobasidiales Cryptobasidiaceae Acaromyces Acaromyces ingoldii
31005920 31005920 PRJNA993416_P_NODE_15694_length_242_cov_0.911243_g15589_i0 PRJNA993416 15694 242 0.911243 2.20520806 Acaromyces ingoldii 215250 Fungi Fungi 46.6 0.00166   NR XP_025375574.1 215250 g15589 i0 43 0.979338842975207 79 37 95.5 2 240 10 873 945 XP_025375574.1 kinesin-domain-containing protein [Acaromyces ingoldii] diamond 237 46.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Exobasidiales Cryptobasidiaceae Acaromyces Acaromyces ingoldii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;