RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA986547" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA986547 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26962957 26962957 PRJNA986547_P_NODE_4042_length_290_cov_1.705069_g3960_i0 PRJNA986547 4042 290 1.705069 4.9447001 Acrasis kona 1008807 Heterolobosea other_Eukaryota 100 8.709999999999999e-23   NR KAL0480019.1 1008807 g3960 i0 66.7 0.962068965517241 93 31 96.2 0 282 4 111 203 KAL0480019.1 CFAP45 [Acrasis kona] diamond 279 100 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28826318 28826318 PRJNA986547_P_NODE_14288_length_226_cov_5.843137_g14206_i0 PRJNA986547 14288 226 5.843137 13.20548962 Acrasis kona 1008807 Heterolobosea other_Eukaryota 80.1 6.32e-17   NR KAL0484069.1 1008807 g14206 i0 51.4 1.91150442477876 72 35 95.6 0 226 11 80 151 KAL0484069.1 coactosin [Acrasis kona] diamond 432 80.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30816301 30816301 PRJNA986547_P_NODE_14314_length_226_cov_4.562092_g14232_i0 PRJNA986547 14314 226 4.562092 10.31032792 Acrasis kona 1008807 Heterolobosea other_Eukaryota 51.6 1.41e-5   NR KAL0483972.1 1008807 g14232 i0 50 1.26106194690265 46 19 55.8 2 140 15 43 88 KAL0483972.1 LIM domain protein [Acrasis kona] diamond 285 51.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32239633 32239633 PRJNA986547_P_NODE_11238_length_243_cov_2.570588_g11156_i0 PRJNA986547 11238 243 2.570588 6.24652884 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 44.7 0.00795   NR XP_044554563.1 51637 g11156 i0 33.3 2.85185185185185 75 50 92.6 0 237 13 538 612 XP_044554563.1 uncharacterized protein C9374_011394 [Naegleria lovaniensis] diamond 693 44.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;