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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA986547" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 29 ✖

bioproject 1

  • PRJNA986547 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
974223 974223 PRJNA986547_P_NODE_4121_length_289_cov_2.379630_g4039_i0 PRJNA986547 4121 289 2.37963 6.8771307 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 114 4.74e-29   NR KAG5182681.1 303371 g4039 i0 62.4 11.1280276816609 93 35 96.5 0 4 282 57 149 KAG5182681.1 ribosomal protein L30, ferredoxin-like fold domain-containing protein [Tribonema minus] diamond 3216 115 0.991304347826087 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema minus
2249533 2249533 PRJNA986547_P_NODE_9062_length_249_cov_4.000000_g8980_i0 PRJNA986547 9062 249 4 9.96 root 1 Root_unresolved Root_unresolved 90.1 2.61e-20   NR ACU45081.1 71001 g8980 i0 74.2 2.3855421686747 66 14 79.5 1 248 51 131 193 ACU45081.1 Rac1 [Pfiesteria piscicida] diamond 594 90.1 1 Eukaryota Sar     Dinophyceae Peridiniales Pfiesteriaceae Pfiesteria Pfiesteria piscicida
12453418 12453418 PRJNA986547_P_NODE_3190_length_310_cov_2.493671_g3108_i0 PRJNA986547 3190 310 2.493671 7.7303801 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 67 2.4e-10   NR CAD2098534.1 5860 g3108 i0 65.2 0.445161290322581 46 16 44.5 0 308 171 731 776 CAD2098534.1 glutamate--tRNA ligase, putative [Plasmodium vinckei] diamond 138 67 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
22651201 22651201 PRJNA986547_P_NODE_1438_length_382_cov_0.951456_g1356_i0 PRJNA986547 1438 382 0.951456 3.63456192 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 195 1.7499999999999998e-61   NR KAF0743747.1 100861 g1356 i0 73.2 2.88219895287958 123 33 96.6 0 13 381 1 123 KAF0743747.1 hypothetical protein Ae201684_001401 [Aphanomyces euteiches] diamond 1101 195 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
26741135 26741135 PRJNA986547_P_NODE_17461_length_196_cov_9.951220_g17379_i0 PRJNA986547 17461 196 9.95122 19.5043912 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 77.8 1.51e-16   NR XP_003884403.1 572307 g17379 i0 60 4.88265306122449 65 26 99.5 0 195 1 43 107 XP_003884403.1 hypothetical protein NCLIV_048030 [Neospora caninum Liverpool] diamond 957 77.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
26905801 26905801 PRJNA986547_P_NODE_2641_length_310_cov_5.962025_g2559_i0 PRJNA986547 2641 310 5.962025 18.4822775 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 73.9 9.54e-14   NR CEO95857.1 37360 g2559 i0 72.9 2.36129032258065 48 12 45.5 1 2 142 133 180 CEO95857.1 hypothetical protein PBRA_004570 [Plasmodiophora brassicae] diamond 732 73.9 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
27563295 27563295 PRJNA986547_P_NODE_11064_length_244_cov_0.900585_g10982_i0 PRJNA986547 11064 244 0.900585 2.1974274 Durusdinium trenchii 1381693 SAR_Eukaryotes SAR_Eukaryotes 107 1.7e-25   NR CAK8992228.1 1381693 g10982 i0 67.9 0.995901639344262 81 23 99.6 1 2 244 45 122 CAK8992228.1 unnamed protein product [Durusdinium trenchii] diamond 243 107 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Durusdinium Durusdinium trenchii
27569442 27569442 PRJNA986547_P_NODE_12244_length_240_cov_5.071856_g12162_i0 PRJNA986547 12244 240 5.071856 12.1724544 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 89.4 1.44e-18   NR XP_067817417.1 4779 g12162 i0 58.2 16.8125 67 28 83.8 0 240 40 539 605 XP_067817417.1 hypothetical protein CCR75_004345 [Bremia lactucae] diamond 4035 89.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
27664382 27664382 PRJNA986547_P_NODE_16224_length_207_cov_4.507463_g16142_i0 PRJNA986547 16224 207 4.507463 9.33044841 Heterotrichea 194287 SAR_Eukaryotes SAR_Eukaryotes 119 1.82e-29   NR OMJ84556.1 5963 g16142 i0 79.7 6.97101449275362 69 14 100 0 207 1 410 478 OMJ84556.1 hypothetical protein SteCoe_14295 [Stentor coeruleus] diamond 1443 119 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
27727713 27727713 PRJNA986547_P_NODE_9064_length_249_cov_3.926136_g8982_i0 PRJNA986547 9064 249 3.926136 9.77607864 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.8 1.67e-8   NR CAG9318551.1 1481888 g8982 i0 44.3 6.24096385542169 79 41 95.2 2 247 11 222 297 CAG9318551.1 unnamed protein product [Blepharisma stoltei] diamond 1554 61.2 0.993464052287582 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
27784814 27784814 PRJNA986547_P_NODE_15304_length_215_cov_9.154930_g15222_i0 PRJNA986547 15304 215 9.15493 19.6830995 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 47.4 2.06e-4   NR CAD8066873.1 65129 g15222 i0 43.4 0.73953488372093 53 29 74 1 56 214 27 78 CAD8066873.1 unnamed protein product [Paramecium sonneborni] diamond 159 47.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
27885193 27885193 PRJNA986547_P_NODE_8725_length_250_cov_3.372881_g8643_i0 PRJNA986547 8725 250 3.372881 8.4322025 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 85.1 4.49e-17   NR XP_067789266.1 4785 g8643 i0 55.1 12.324 78 33 93.6 1 234 1 45 120 XP_067789266.1 Alanine aminotransferase 2 [Phytophthora cinnamomi] diamond 3081 85.9 0.990686845168801 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
28005832 28005832 PRJNA986547_P_NODE_7065_length_261_cov_1.329787_g6983_i0 PRJNA986547 7065 261 1.329787 3.47074407 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 58.9 9.43e-8   NR KAL3800302.1 29204 g6983 i0 42.2 0.954022988505747 83 40 93.1 2 261 19 397 473 KAL3800302.1 hypothetical protein HJC23_003598 [Cyclotella cryptica] diamond 249 58.9 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
28263953 28263953 PRJNA986547_P_NODE_1786_length_351_cov_2.956835_g1704_i0 PRJNA986547 1786 351 2.956835 10.37849085 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 135 6.28e-37   NR KAG5181628.1 303371 g1704 i0 61.7 6.94017094017094 115 43 98.3 1 346 2 75 188 KAG5181628.1 ribosomal protein S6e-domain-containing protein [Tribonema minus] diamond 2436 135 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema minus
28289605 28289605 PRJNA986547_P_NODE_12566_length_238_cov_3.169697_g12484_i0 PRJNA986547 12566 238 3.169697 7.54387886 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 94.7 1.38e-20   NR CAE8714734.1 89957 g12484 i0 55.8 2.79831932773109 77 34 97.1 0 237 7 80 156 CAE8714734.1 unnamed protein product [Polarella glacialis] diamond 666 94.7 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
28958966 28958966 PRJNA986547_P_NODE_13248_length_233_cov_5.300000_g13166_i0 PRJNA986547 13248 233 5.3 12.349 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 72 9.3e-13   NR RHY18808.1 112090 g13166 i0 69.6 2.88412017167382 56 17 72.1 0 168 1 193 248 RHY18808.1 hypothetical protein DYB25_003459 [Aphanomyces astaci] diamond 672 72.4 0.994475138121547 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
28990628 28990628 PRJNA986547_P_NODE_4908_length_280_cov_2.265700_g4826_i0 PRJNA986547 4908 280 2.2657 6.34396 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 55.1 2.76e-6   NR KAE8913668.1 53985 g4826 i0 39.3 2.86071428571429 89 39 83.6 3 1 234 368 452 KAE8913668.1 hypothetical protein PF003_g2265 [Phytophthora fragariae] diamond 801 55.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
28990629 28990629 PRJNA986547_P_NODE_8188_length_253_cov_1.677778_g8106_i0 PRJNA986547 8188 253 1.677778 4.24477834 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 103 1.2399999999999999e-23   NR CAE7684790.1 230985 g8106 i0 59 5.91699604743083 83 34 98.4 0 249 1 25 107 CAE7684790.1 RHM2, partial [Symbiodinium sp. KB8] diamond 1497 104 0.990384615384615 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium sp. KB8
30285518 30285518 PRJNA986547_P_NODE_16032_length_209_cov_4.257353_g15950_i0 PRJNA986547 16032 209 4.257353 8.89786777 root 1 Root_unresolved Root_unresolved 80.5 1.19e-15   NR RLN45783.1 325452 g15950 i0 62.1 9.90430622009569 58 21 83.3 1 197 24 680 736 RLN45783.1 hypothetical protein BBJ29_004098 [Phytophthora kernoviae] diamond 2070 81.3 0.990159901599016 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
30311319 30311319 PRJNA986547_P_NODE_17552_length_196_cov_4.544715_g17470_i0 PRJNA986547 17552 196 4.544715 8.9076414 Cladocopium goreaui 2562237 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0145   NR CAL1166617.1 2562237 g17470 i0 31.6 1.72959183673469 57 38 87.2 1 172 2 93 148 CAL1166617.1 unnamed protein product [Cladocopium goreaui] diamond 339 43.1 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Cladocopium Cladocopium goreaui
30380296 30380296 PRJNA986547_P_NODE_12632_length_237_cov_6.884146_g12550_i0 PRJNA986547 12632 237 6.884146 16.31542602 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 85.5 2.83e-18   NR KAA0155642.1 33653 g12550 i0 55.7 4 79 35 100 0 237 1 92 170 KAA0155642.1 hypothetical protein FNF29_01559 [Cafeteria roenbergensis] diamond 948 85.9 0.9953434225844 Eukaryota Sar     Bigyra Bicosoecida Cafeteriaceae Cafeteria Cafeteria roenbergensis
31005888 31005888 PRJNA986547_P_NODE_854_length_473_cov_8.662500_g772_i0 PRJNA986547 854 473 8.6625 40.973625 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 82.8 8.66e-16   NR TEB19254.1 2494336 g772 i0 40.9 0.86892177589852 137 73 83.1 3 399 7 66 200 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 411 82.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
31353654 31353654 PRJNA986547_P_NODE_8916_length_250_cov_0.870056_g8834_i0 PRJNA986547 8916 250 0.870056 2.17514 Phytophthora oleae 2107226 SAR_Eukaryotes SAR_Eukaryotes 51.6 3.08e-5   NR KAL3666721.1 2107226 g8834 i0 38.7 2.652 62 38 74.4 0 237 52 605 666 KAL3666721.1 hypothetical protein V7S43_008344 [Phytophthora oleae] diamond 663 51.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora oleae
31416893 31416893 PRJNA986547_P_NODE_4596_length_283_cov_10.938095_g4514_i0 PRJNA986547 4596 283 10.938095 30.95480885 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 81.3 1.32e-17   NR XP_012648836.1 1133968 g4514 i0 53 0.879858657243816 83 38 86.9 1 36 281 8 90 XP_012648836.1 small subunit ribosomal protein S25e [Babesia microti strain RI] diamond 249 81.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
31549556 31549556 PRJNA986547_P_NODE_16776_length_202_cov_4.891473_g16694_i0 PRJNA986547 16776 202 4.891473 9.88077546 Triparma 722752 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0117   NR GMH67021.1 1606541 g16694 i0 40.5 2.43564356435644 42 23 59.4 1 131 12 101 142 GMH67021.1 hypothetical protein TrST_g515 [Triparma strigata] diamond 492 43.9 0.990888382687927 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Triparma Triparma strigata
31707425 31707425 PRJNA986547_P_NODE_16497_length_204_cov_7.496183_g16415_i0 PRJNA986547 16497 204 7.496183 15.29221332 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 93.2 3.76e-20   NR CCI45297.1 65357 g16415 i0 58.8 26.9558823529412 68 27 98.5 1 202 2 378 445 CCI45297.1 unnamed protein product [Albugo candida] diamond 5499 94 0.991489361702128 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
31922935 31922935 PRJNA986547_P_NODE_15937_length_209_cov_12.992647_g15855_i0 PRJNA986547 15937 209 12.992647 27.15463223 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0179   NR XP_008875065.1 157072 g15855 i0 45.2 0.889952153110048 62 31 86.1 2 3 182 441 501 XP_008875065.1 hypothetical protein H310_10446 [Aphanomyces invadans] diamond 186 43.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
32017877 32017877 PRJNA986547_P_NODE_13538_length_231_cov_5.329114_g13456_i0 PRJNA986547 13538 231 5.329114 12.31025334 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 133 2.0199999999999997e-37   NR KAJ1436144.1 483371 g13456 i0 94 1.74025974025974 67 4 87 0 31 231 1 67 KAJ1436144.1 small GTPase superfamily [Ochromonadaceae sp. CCMP2298] diamond 402 133 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
32719166 32719166 PRJNA986547_P_NODE_8260_length_252_cov_3.363128_g8178_i0 PRJNA986547 8260 252 3.363128 8.47508256 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 81.3 2.61e-16   NR CBN76942.1 2880 g8178 i0 47.6 5.07142857142857 84 44 100 0 1 252 32 115 CBN76942.1 conserved unknown protein [Ectocarpus siliculosus] diamond 1278 81.3 1 Eukaryota Sar     Phaeophyceae Ectocarpales Ectocarpaceae Ectocarpus Ectocarpus siliculosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;