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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA986547" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 6 ✖

bioproject 1

  • PRJNA986547 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28826321 28826321 PRJNA986547_P_NODE_3888_length_292_cov_2.406393_g3806_i0 PRJNA986547 3888 292 2.406393 7.02666756 Prymnesium parvum 97485 Haptophyta other_Eukaryota 131 5.09e-33   NR KAL1508564.1 97485 g3806 i0 68.4 0.976027397260274 95 30 97.6 0 2 286 604 698 KAL1508564.1 hypothetical protein AB1Y20_004663 [Prymnesium parvum] diamond 285 131 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
29047666 29047666 PRJNA986547_P_NODE_16808_length_202_cov_4.077519_g16726_i0 PRJNA986547 16808 202 4.077519 8.23658838 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 89.7 6.89e-22   NR KAJ1628734.1 483367 g16726 i0 78.3 0.891089108910891 60 12 89.1 1 181 2 1 59 KAJ1628734.1 ribosomal protein S30 [Pavlovales sp. CCMP2436] diamond 180 89.7 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436
30469027 30469027 PRJNA986547_P_NODE_17173_length_199_cov_5.111111_g17091_i0 PRJNA986547 17173 199 5.111111 10.17111089 Chrysochromulina tobinii 1460289 Haptophyta other_Eukaryota 61.2 5.1e-9   NR KOO25834.1 1460289 g17091 i0 50 0.934673366834171 62 31 93.5 0 189 4 196 257 KOO25834.1 putative s-acyltransferase [Chrysochromulina tobinii] diamond 186 61.2 1 Eukaryota Haptista   Haptophyta   Prymnesiales Chrysochromulinaceae Chrysochromulina Chrysochromulina tobinii
31897253 31897253 PRJNA986547_P_NODE_6757_length_263_cov_1.621053_g6675_i0 PRJNA986547 6757 263 1.621053 4.26336939 Diacronema 70451 Haptophyta other_Eukaryota 72 8.92e-13   NR KAJ1639803.1 483367 g6675 i0 34.2 1.80228136882129 79 52 90.1 0 23 259 6 84 KAJ1639803.1 synaptobrevin-domain-containing protein [Pavlovales sp. CCMP2436] diamond 474 72 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436
31992136 31992136 PRJNA986547_P_NODE_12998_length_235_cov_3.364198_g12916_i0 PRJNA986547 12998 235 3.364198 7.9058653 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 9.31e-6   NR XP_005768811.1 280463 g12916 i0 43.6 2.54042553191489 39 22 49.8 0 2 118 291 329 XP_005768811.1 hypothetical protein EMIHUDRAFT_356164 [Emiliania huxleyi CCMP1516] diamond 597 52.8 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
32776162 32776162 PRJNA986547_P_NODE_760_length_500_cov_3.484778_g678_i0 PRJNA986547 760 500 3.484778 17.42389 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 72.4 1.75e-11   NR KAJ1620034.1 483367 g678 i0 50 1.308 70 35 42 0 78 287 54 123 KAJ1620034.1 mitochondrial carrier domain-containing protein [Pavlovales sp. CCMP2436] diamond 654 72.4 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;