RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA986481" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA986481 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29552472 29552472 PRJNA986481_P_NODE_40710_length_263_cov_0.943925_g40185_i0 PRJNA986481 40710 263 0.943925 2.4825227499999998 Caudoviricetes sp. 2832643 Viruses Viruses 53.9 2.35e-7   NR XOR49722.1 2832643 g40185 i0 57.9 0.433460076045627 38 16 43.3 0 3 116 26 63 XOR49722.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 114 53.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30594968 30594968 PRJNA986481_P_NODE_17213_length_395_cov_2.057803_g16688_i0 PRJNA986481 17213 395 2.057803 8.12832185 Listeria phage LPJP1 2852115 Viruses Viruses 87.4 4.78e-17   NR QXN67942.1 2852115 g16688 i0 38 0.979746835443038 129 77 97.2 3 390 7 207 333 QXN67942.1 type 2 topoisomerase subunit B [Listeria phage LPJP1] diamond 387 87.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Listeria phage LPJP1
32334561 32334561 PRJNA986481_P_NODE_32939_length_285_cov_1.283898_g32414_i0 PRJNA986481 32939 285 1.283898 3.6591093 Caudoviricetes sp. 2832643 Viruses Viruses 45.4 0.00678   NR DAX49623.1 2832643 g32414 i0 34.4 0.673684210526316 64 42 67.4 0 10 201 209 272 DAX49623.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 192 45.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;