RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA983848" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA983848 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27089679 27089679 PRJNA983848_P_NODE_98302_length_306_cov_1.253219_g92419_i0 PRJNA983848 98302 306 1.253219 3.83485014 Chloroflexota bacterium 2026724 Bacteria Bacteria 60.5 4.66e-8   NR MBV9174770.1 2026724 g92419 i0 63.6 1.19607843137255 44 16 43.1 0 27 158 886 929 MBV9174770.1 aconitate hydratase AcnA [Chloroflexota bacterium] diamond 366 60.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28605421 28605421 PRJNA983848_P_NODE_136127_length_254_cov_2.381215_g130244_i0 PRJNA983848 136127 254 2.381215 6.0482861 Anaerolineae bacterium CG1_ 2052143 Bacteria Bacteria 51.2 4.19e-5   NR OIN95140.1 1805002 g130244 i0 34.5 1.02755905511811 87 42 89.8 3 234 7 161 243 OIN95140.1 MAG: hypothetical protein AUJ21_03700 [Anaerolineae bacterium CG1_02_58_13] diamond 261 51.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium CG1_02_58_13
30879361 30879361 PRJNA983848_P_NODE_147614_length_248_cov_0.891429_g141731_i0 PRJNA983848 147614 248 0.891429 2.21074392 Anaerolineales bacterium 2073117 Bacteria Bacteria 65.1 5.31e-10   NR HLE29177.1 2073117 g141731 i0 63.6 3.13306451612903 55 19 65.3 1 247 86 70 124 HLE29177.1 carboxypeptidase regulatory-like domain-containing protein [Anaerolineales bacterium] diamond 777 65.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
31448491 31448491 PRJNA983848_P_NODE_163136_length_235_cov_2.265432_g157253_i0 PRJNA983848 163136 235 2.265432 5.3237652 Anaerolineales bacterium 2073117 Bacteria Bacteria 44.3 0.00894   NR HET6845431.1 2073117 g157253 i0 40.4 0.6 47 26 57.4 1 176 42 68 114 HET6845431.1 zinc-binding dehydrogenase [Anaerolineales bacterium] diamond 141 44.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32112813 32112813 PRJNA983848_P_NODE_155978_length_244_cov_0.912281_g150095_i0 PRJNA983848 155978 244 0.912281 2.22596564 Chloroflexia bacterium 2448782 Bacteria Bacteria 156 1.4e-46   NR MBL8129287.1 2448782 g150095 i0 97.5 0.995901639344262 81 2 99.6 0 243 1 40 120 MBL8129287.1 GNAT family N-acetyltransferase [Chloroflexia bacterium] diamond 243 156 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
32366039 32366039 PRJNA983848_P_NODE_121199_length_272_cov_1.346734_g115316_i0 PRJNA983848 121199 272 1.346734 3.66311648 Anaerolineales bacterium 2073117 Bacteria Bacteria 109 7.96e-28   NR MDP6585467.1 2073117 g115316 i0 66.3 0.882352941176471 80 27 88.2 0 33 272 7 86 MDP6585467.1 endonuclease/exonuclease/phosphatase family protein [Anaerolineales bacterium] diamond 240 109 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32845077 32845077 PRJNA983848_P_NODE_116220_length_278_cov_1.907317_g110337_i0 PRJNA983848 116220 278 1.907317 5.30234126 root 1 Root_unresolved Root_unresolved 67 1.62e-10   NR MDY0125373.1 2024896 g110337 i0 54.2 2.50359712230216 59 27 63.7 0 101 277 274 332 MDY0125373.1 transketolase [Anaerolineaceae bacterium] diamond 696 67 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;