RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA983848" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 4 ✖

bioproject 1

  • PRJNA983848 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27721816 27721816 PRJNA983848_P_NODE_149844_length_247_cov_0.896552_g143961_i0 PRJNA983848 149844 247 0.896552 2.21448344 uncultured Caudovirales phage 2100421 Viruses Viruses 75.9 4.98e-16   NR CAB4148105.1 2100421 g143961 i0 63.5 0.631578947368421 52 16 63.2 1 247 92 9 57 CAB4148105.1 hypothetical protein UFOVP431_110 [uncultured Caudovirales phage] diamond 156 75.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
28921007 28921007 PRJNA983848_P_NODE_150228_length_247_cov_0.896552_g144345_i0 PRJNA983848 150228 247 0.896552 2.21448344 Caudoviricetes sp. 2832643 Viruses Viruses 68.6 3.23e-11   NR XOR78579.1 2832643 g144345 i0 72.7 0.534412955465587 44 12 53.4 0 247 116 887 930 XOR78579.1 MAG: p036 protein [Caudoviricetes sp.] diamond 132 68.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29589864 29589864 PRJNA983848_P_NODE_142070_length_251_cov_0.876404_g136187_i0 PRJNA983848 142070 251 0.876404 2.19977404 root 1 Root_unresolved Root_unresolved 108 2.04e-25   NR YP_009005974.1 1458697 g136187 i0 63.4 8.85657370517928 82 30 98 0 247 2 396 477 YP_009005974.1 DNA polymerase [Rhizobium phage vB_RglS_P106B] diamond 2223 109 0.990825688073395 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Rigallicvirus Rigallicvirus P106B
32366044 32366044 PRJNA983848_P_NODE_143659_length_250_cov_0.881356_g137776_i0 PRJNA983848 143659 250 0.881356 2.20339 Haloarcula hispanica tailed virus 2 1273751 Viruses Viruses 115 7.83e-29   NR YP_008060355.1 1273751 g137776 i0 64.2 0.972 81 29 97.2 0 3 245 202 282 YP_008060355.1 minor tail protein [Haloarcula hispanica tailed virus 2] diamond 243 115 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Saparoviridae Halohivirus Halohivirus suolae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;