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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA983848" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 7 ✖

bioproject 1

  • PRJNA983848 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27595186 27595186 PRJNA983848_P_NODE_139664_length_252_cov_0.871508_g133781_i0 PRJNA983848 139664 252 0.871508 2.19620016 Patescibacteria group bacterium 2052139 Bacteria Bacteria 42 0.0495   NR HYF96458.1 2052139 g133781 i0 34.5 0.654761904761905 55 32 60.7 1 53 205 95 149 HYF96458.1 deaminase [Patescibacteria group bacterium] diamond 165 42 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27759234 27759234 PRJNA983848_P_NODE_137484_length_253_cov_1.611111_g131601_i0 PRJNA983848 137484 253 1.611111 4.07611083 Pseudomonadati 3379134 Bacteria Bacteria 42.4 0.0371   NR HYA96478.1 2072417 g131601 i0 47.5 2.37154150197628 40 20 46.2 1 251 135 121 160 HYA96478.1 DUF177 domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 600 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29710155 29710155 PRJNA983848_P_NODE_139810_length_252_cov_0.871508_g133927_i0 PRJNA983848 139810 252 0.871508 2.19620016 Minisyncoccota bacterium 2053589 Bacteria Bacteria 77 3.46e-14   NR HEY6019682.1 2053589 g133927 i0 46.8 0.916666666666667 77 41 91.7 0 251 21 311 387 HEY6019682.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 231 77 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29741831 29741831 PRJNA983848_P_NODE_146190_length_249_cov_0.886364_g140307_i0 PRJNA983848 146190 249 0.886364 2.20704636 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 51.6 2.9e-5   NR HOW45102.1 2052149 g140307 i0 33.3 2.08433734939759 87 44 88 3 21 239 246 332 HOW45102.1 Do family serine endopeptidase [Candidatus Aminicenantes bacterium] diamond 519 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
29963229 29963229 PRJNA983848_P_NODE_137991_length_253_cov_0.866667_g132108_i0 PRJNA983848 137991 253 0.866667 2.19266751 bacterium (Candidatus Gribaldobacteria) CG_4_1 2798521 Bacteria Bacteria 47.4 8.58e-4   NR PIZ01041.1 2014266 g132108 i0 50 1.04347826086957 44 22 52.2 0 239 108 98 141 PIZ01041.1 MAG: 30S ribosomal protein S1 [bacterium (Candidatus Gribaldobacteria) CG_4_10_14_0_8_um_filter_33_9] diamond 264 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Gribaldobacteria         bacterium (Candidatus Gribaldobacteria) CG_4_10_14_0_8_um_filter_33_9
30089454 30089454 PRJNA983848_P_NODE_140132_length_252_cov_0.871508_g134249_i0 PRJNA983848 140132 252 0.871508 2.19620016 Patescibacteria group bacterium 2052139 Bacteria Bacteria 61.6 8.87e-9   NR MEA3357601.1 2052139 g134249 i0 59.6 0.55952380952381 47 19 56 0 218 78 252 298 MEA3357601.1 hypothetical protein [Patescibacteria group bacterium] diamond 141 61.6 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30784644 30784644 PRJNA983848_P_NODE_144634_length_249_cov_2.215909_g138751_i0 PRJNA983848 144634 249 2.215909 5.51761341 candidate division WWE3 bacterium CSP1-7 1576480 Bacteria Bacteria 48.9 1.92e-5   NR KRT67739.1 1576480 g138751 i0 52.3 1.02409638554217 44 21 53 0 62 193 15 58 KRT67739.1 MAG: Uncharacterized protein XU08_C0001G0148 [candidate division WWE3 bacterium CSP1-7] diamond 255 48.9 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium CSP1-7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;