RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA983838" and tax_phylum = "Preplasmiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Preplasmiviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA983838 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28289508 28289508 PRJNA983838_P_NODE_117506_length_243_cov_0.917647_g115139_i0 PRJNA983838 117506 243 0.917647 2.22988221 Pimephales minnow adintovirus 2609864 Viruses Viruses 73.2 1.71e-13   NR DAC81394.1 2609864 g115139 i0 53.8 0.962962962962963 78 36 96.3 0 236 3 63 140 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 234 73.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
28920997 28920997 PRJNA983838_P_NODE_122968_length_228_cov_2.012903_g120601_i0 PRJNA983838 122968 228 2.012903 4.5894188400000004 Adintovirus bos4377 3115894 Viruses Viruses 87.4 7.29e-19   NR DBA50496.1 3115894 g120601 i0 55.3 1 76 34 100 0 1 228 111 186 DBA50496.1 MAG TPA_asm: Adintoc2 [Adintovirus bos4377] diamond 228 87.4 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
31954390 31954390 PRJNA983838_P_NODE_118277_length_242_cov_1.721893_g115910_i0 PRJNA983838 118277 242 1.721893 4.16698106 Pimephales minnow adintovirus 2609864 Viruses Viruses 83.2 2.58e-17   NR DAC81394.1 2609864 g115910 i0 47.5 0.991735537190083 80 42 99.2 0 3 242 43 122 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 240 83.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;