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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA983838" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA983838 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2240270 2240270 PRJNA983838_P_NODE_20222_length_926_cov_2.762016_g18210_i0 PRJNA983838 20222 926 2.762016 25.57626816 Chlorophyta 3041 Plants Plants 460 7.239999999999998e-152   NR XP_002500915.1 296587 g18210 i0 78.4 5.67278617710583 282 61 91.4 0 1 846 648 929 XP_002500915.1 predicted protein [Micromonas commoda] diamond 5253 460 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
17543960 17543960 PRJNA983838_P_NODE_98134_length_263_cov_1.394737_g95767_i0 PRJNA983838 98134 263 1.394737 3.66815831 root 1 Root_unresolved Root_unresolved 136 6.46e-35   NR XP_001417128.1 436017 g95767 i0 70.1 4.96197718631179 87 26 99.2 0 3 263 316 402 XP_001417128.1 predicted protein [Ostreococcus lucimarinus CCE9901] diamond 1305 137 0.992700729927007 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Ostreococcus Ostreococcus sp. 'lucimarinus'
25192216 25192216 PRJNA983838_P_NODE_93600_length_271_cov_1.525253_g91233_i0 PRJNA983838 93600 271 1.525253 4.13343563 Chlorophyta 3041 Plants Plants 138 9.21e-38   NR CAG9462523.1 765719 g91233 i0 72.2 72.7306273062731 90 25 99.6 0 2 271 152 241 CAG9462523.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 19710 138 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
27184218 27184218 PRJNA983838_P_NODE_103502_length_254_cov_1.624309_g101135_i0 PRJNA983838 103502 254 1.624309 4.12574486 Micromonas pusilla CCMP1545 564608 Plants Plants 84.3 3.51e-19   NR XP_003055561.1 564608 g101135 i0 69.6 0.661417322834646 56 17 66.1 0 176 9 32 87 XP_003055561.1 uncharacterized protein MICPUCDRAFT_50343 [Micromonas pusilla CCMP1545] diamond 168 84.3 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas pusilla
27253469 27253469 PRJNA983838_P_NODE_122723_length_228_cov_3.645161_g120356_i0 PRJNA983838 122723 228 3.645161 8.31096708 Chlorophyta 3041 Plants Plants 64.3 3.82e-10   NR KAK3282277.1 36881 g120356 i0 49.2 7.21052631578947 61 31 80.3 0 228 46 188 248 KAK3282277.1 hypothetical protein CYMTET_9977 [Cymbomonas tetramitiformis] diamond 1644 64.3 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
27759232 27759232 PRJNA983838_P_NODE_100344_length_259_cov_1.677419_g97977_i0 PRJNA983838 100344 259 1.677419 4.34451521 Viridiplantae 33090 Plants Plants 47.8 7.71e-4   NR KAK3236469.1 36881 g97977 i0 42 1.25096525096525 50 29 57.9 0 18 167 949 998 KAK3236469.1 hypothetical protein CYMTET_53396 [Cymbomonas tetramitiformis] diamond 324 47.8 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
28826197 28826197 PRJNA983838_P_NODE_100328_length_259_cov_1.677419_g97961_i0 PRJNA983838 100328 259 1.677419 4.34451521 Chloropicon primus 1764295 Plants Plants 50.4 8.62e-5   NR QDZ22834.1 1764295 g97961 i0 48.9 1.08880308880309 47 22 52.1 1 124 258 325 371 QDZ22834.1 hypothetical protein A3770_08p53520 [Chloropicon primus] diamond 282 50.4 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon primus
28990598 28990598 PRJNA983838_P_NODE_83588_length_291_cov_1.431193_g81221_i0 PRJNA983838 83588 291 1.431193 4.16477163 Chlorophyta 3041 Plants Plants 120 3.24e-29   NR KAL4853064.1 3077 g81221 i0 62.9 19.0721649484536 89 33 91.8 0 289 23 1390 1478 KAL4853064.1 Proteasome subunit alpha type-2 [Chlorella vulgaris] diamond 5550 121 0.991735537190083 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
29363264 29363264 PRJNA983838_P_NODE_104429_length_253_cov_0.866667_g102062_i0 PRJNA983838 104429 253 0.866667 2.19266751 Volvox reticuliferus 1737510 Plants Plants 58.5 1.14e-7   NR GIL88831.1 1737510 g102062 i0 37 1.92094861660079 81 50 94.9 1 249 10 459 539 GIL88831.1 hypothetical protein Vretifemale_16749 [Volvox reticuliferus] diamond 486 58.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox reticuliferus
30380262 30380262 PRJNA983838_P_NODE_26312_length_745_cov_7.004464_g24058_i0 PRJNA983838 26312 745 7.004464 52.1832568 Eukaryota 2759 Plants Plants 165 5.79e-45   NR WIA40358.1 3088 g24058 i0 45.5 7.40134228187919 189 99 74.5 3 4 558 202 390 WIA40358.1 hypothetical protein OEZ86_013722 [Tetradesmus obliquus] diamond 5514 166 0.993975903614458 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
30911158 30911158 PRJNA983838_P_NODE_71794_length_325_cov_1.238095_g69427_i0 PRJNA983838 71794 325 1.238095 4.02380875 Chlamydomonas sp. UWO 241 1653778 Plants Plants 51.2 9.29e-5   NR KAG1665159.1 1653778 g69427 i0 56.9 0.470769230769231 51 21 47.1 1 6 158 292 341 KAG1665159.1 hypothetical protein FOA52_005540 [Chlamydomonas sp. UWO 241] diamond 153 51.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
31106453 31106453 PRJNA983838_P_NODE_117115_length_243_cov_1.270588_g114748_i0 PRJNA983838 117115 243 1.270588 3.08752884 Chlamydomonadales 3042 Plants Plants 109 1.41e-29   NR XP_042924859.1 3055 g114748 i0 82 2.2962962962963 61 11 75.3 0 6 188 1 61 XP_042924859.1 uncharacterized protein CHLRE_05g237700v5 [Chlamydomonas reinhardtii] diamond 558 110 0.990909090909091 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
31194966 31194966 PRJNA983838_P_NODE_108115_length_250_cov_0.881356_g105748_i0 PRJNA983838 108115 250 0.881356 2.20339 Scenedesmus sp. PABB 2909984 Plants Plants 49.3 1.93e-4   NR KAF8055395.1 2742167 g105748 i0 73.3 0.36 30 8 36 0 236 147 134 163 KAF8055395.1 XBAT31 [Scenedesmus sp. PABB004] diamond 90 49.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
31290133 31290133 PRJNA983838_P_NODE_105235_length_252_cov_1.743017_g102868_i0 PRJNA983838 105235 252 1.743017 4.39240284 Coccomyxa elongata 1965095 Plants Plants 84 1.29e-16   NR CAL8466735.1 1965095 g102868 i0 54.1 0.880952380952381 74 34 88.1 0 238 17 696 769 CAL8466735.1 g6271 [Coccomyxa elongata] diamond 222 84 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
31448467 31448467 PRJNA983838_P_NODE_122016_length_231_cov_2.803797_g119649_i0 PRJNA983838 122016 231 2.803797 6.47677107 Symbiochloris irregularis 706552 Plants Plants 100 5.04e-23   NR KAK9807924.1 706552 g119649 i0 56.6 0.987012987012987 76 30 97.4 2 1 225 80 153 KAK9807924.1 hypothetical protein WJX73_002821 [Symbiochloris irregularis] diamond 228 100 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
31517792 31517792 PRJNA983838_P_NODE_77276_length_307_cov_7.615385_g74909_i0 PRJNA983838 77276 307 7.615385 23.37923195 Viridiplantae 33090 Plants Plants 57.4 1.94e-8   NR XP_007514946.1 41875 g74909 i0 56.5 1.08469055374593 46 20 45 0 57 194 7 52 XP_007514946.1 predicted protein [Bathycoccus prasinos] diamond 333 57.4 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Bathycoccus Bathycoccus prasinos
32112798 32112798 PRJNA983838_P_NODE_81398_length_296_cov_2.762332_g79031_i0 PRJNA983838 81398 296 2.762332 8.17650272 Bathycoccus prasinos 41875 Plants Plants 81.6 2.74e-18   NR XP_007515728.1 41875 g79031 i0 85 0.405405405405405 40 6 40.5 0 48 167 1 40 XP_007515728.1 predicted protein [Bathycoccus prasinos] diamond 120 81.6 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Bathycoccus Bathycoccus prasinos
32750651 32750651 PRJNA983838_P_NODE_107520_length_250_cov_2.508475_g105153_i0 PRJNA983838 107520 250 2.508475 6.2711875 Eukaryota 2759 Plants Plants 138 8.64e-39   NR XP_011401684.1 3075 g105153 i0 84.3 1776.804 83 13 99.6 0 249 1 12 94 XP_011401684.1 Histone H3.1 [Auxenochlorella protothecoides] diamond 444201 139 0.992805755395683 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;