RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA982106" and tax_phylum = "Myxococcota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA982106 · 32 ✖

analysis 1

  • diamond · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14991733 14991733 PRJNA982106_P_NODE_22612_length_249_cov_1.352273_g22372_i0 PRJNA982106 22612 249 1.352273 3.36715977 Anaeromyxobacteraceae bacterium 2510643 Bacteria Bacteria 149 3.8e-41   NR HET9553106.1 2510643 g22372 i0 78.3 2 83 18 100 0 249 1 234 316 HET9553106.1 acetyl ornithine aminotransferase family protein [Anaeromyxobacteraceae bacterium] diamond 498 149 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae   Anaeromyxobacteraceae bacterium
17541885 17541885 PRJNA982106_P_NODE_31574_length_242_cov_0.911243_g31334_i0 PRJNA982106 31574 242 0.911243 2.20520806 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 71.2 3.2e-13   NR MBM4255290.1 2026735 g31334 i0 76.1 0.570247933884298 46 11 57 0 241 104 126 171 MBM4255290.1 cyclic nucleotide-binding domain-containing protein [Deltaproteobacteria bacterium] diamond 138 71.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
21365878 21365878 PRJNA982106_P_NODE_21657_length_250_cov_0.870056_g21417_i0 PRJNA982106 21657 250 0.870056 2.17514 Pseudomonadati 3379134 Bacteria Bacteria 141 5.709999999999999e-37   NR MBM2805606.1 2026735 g21417 i0 89 4.92 82 9 98.4 0 248 3 307 388 MBM2805606.1 putative Sensor protein yycG [Deltaproteobacteria bacterium] diamond 1230 142 0.992957746478873 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
25189899 25189899 PRJNA982106_P_NODE_15940_length_278_cov_1.721951_g15700_i0 PRJNA982106 15940 278 1.721951 4.78702378 Myxococcia 32015 Bacteria Bacteria 152 1.6199999999999996e-40   NR WP_293274544.1 1962667 g15700 i0 80.4 2.97841726618705 92 18 99.3 0 278 3 84 175 WP_293274544.1 serine/threonine-protein kinase [Nannocystis sp.] diamond 828 152 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis sp.
26614587 26614587 PRJNA982106_P_NODE_17541_length_268_cov_1.343590_g17301_i0 PRJNA982106 17541 268 1.34359 3.6008212 Polyangia bacterium 3058050 Bacteria Bacteria 98.2 5.83e-22   NR HEY5451668.1 3058050 g17301 i0 58 0.985074626865672 88 37 98.5 0 266 3 33 120 HEY5451668.1 PHB depolymerase family esterase [Polyangia bacterium] diamond 264 98.2 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
26836587 26836587 PRJNA982106_P_NODE_13801_length_292_cov_1.926941_g13561_i0 PRJNA982106 13801 292 1.926941 5.62666772 Myxococcota bacterium 2818507 Bacteria Bacteria 45.1 0.00975   NR MEO0602611.1 2818507 g13561 i0 30.4 1.28424657534247 125 52 92.5 3 23 292 8 132 MEO0602611.1 hypothetical protein [Myxococcota bacterium] diamond 375 45.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
26962836 26962836 PRJNA982106_P_NODE_17982_length_265_cov_2.375000_g17742_i0 PRJNA982106 17982 265 2.375 6.29375 Nannocystaceae bacterium 2545255 Bacteria Bacteria 43.1 0.0315   NR HET6585299.1 2545255 g17742 i0 45.7 0.39622641509434 35 19 39.6 0 5 109 204 238 HET6585299.1 hypothetical protein [Nannocystaceae bacterium] diamond 105 43.1 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae   Nannocystaceae bacterium
27405778 27405778 PRJNA982106_P_NODE_23623_length_249_cov_0.875000_g23383_i0 PRJNA982106 23623 249 0.875 2.17875 Myxococcaceae bacterium 2484252 Bacteria Bacteria 139 7.019999999999999e-40   NR HTS80097.1 2484252 g23383 i0 82.9 1.97590361445783 82 14 98.8 0 248 3 37 118 HTS80097.1 TetR/AcrR family transcriptional regulator [Myxococcaceae bacterium] diamond 492 139 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
27468858 27468858 PRJNA982106_P_NODE_31803_length_241_cov_1.571429_g31563_i0 PRJNA982106 31803 241 1.571429 3.78714389 Archangium violaceum 83451 Bacteria Bacteria 67.4 4.13e-11   NR WP_204222119.1 83451 g31563 i0 46.5 4.55601659751037 71 37 87.1 1 32 241 87 157 WP_204222119.1 hypothetical protein [Archangium violaceum] diamond 1098 67.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium violaceum
27506504 27506504 PRJNA982106_P_NODE_16443_length_275_cov_1.212871_g16203_i0 PRJNA982106 16443 275 1.212871 3.33539525 Corallococcus 83461 Bacteria Bacteria 42.4 0.0253   NR RYZ46295.1 2484252 g16203 i0 49.1 1.2 55 27 58.9 1 86 247 47 101 RYZ46295.1 MAG: histidine phosphatase, partial [Myxococcaceae bacterium] diamond 330 42.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
27506506 27506506 PRJNA982106_P_NODE_26123_length_246_cov_0.890173_g25883_i0 PRJNA982106 26123 246 0.890173 2.18982558 Labilithrix 1524217 Bacteria Bacteria 130 1.5299999999999998e-37   NR HVH45935.1 1971228 g25883 i0 86.3 6.65853658536585 80 9 97.6 1 244 5 14 91 HVH45935.1 hypothetical protein [Labilithrix sp.] diamond 1638 130 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
27816250 27816250 PRJNA982106_P_NODE_22524_length_250_cov_0.870056_g22284_i0 PRJNA982106 22524 250 0.870056 2.17514 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 121 9.89e-32   NR MBW1684986.1 2026735 g22284 i0 75.6 0.984 82 20 98.4 0 2 247 73 154 MBW1684986.1 enoyl-CoA hydratase/isomerase family protein [Deltaproteobacteria bacterium] diamond 246 121 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27910518 27910518 PRJNA982106_P_NODE_26985_length_246_cov_0.890173_g26745_i0 PRJNA982106 26985 246 0.890173 2.18982558 Byssovorax sp. 2927945 Bacteria Bacteria 124 4.5299999999999996e-32   NR MFO0758087.1 2927945 g26745 i0 78 1 82 17 98.8 1 245 3 168 249 MFO0758087.1 hypothetical protein [Byssovorax sp.] diamond 246 124 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Byssovorax Byssovorax sp.
27942458 27942458 PRJNA982106_P_NODE_27005_length_246_cov_0.890173_g26765_i0 PRJNA982106 27005 246 0.890173 2.18982558 Myxococcaceae bacterium 2484252 Bacteria Bacteria 99.4 1.06e-23   NR HET9158668.1 2484252 g26765 i0 77 0.74390243902439 61 14 74.4 0 246 64 147 207 HET9158668.1 helix-turn-helix domain-containing protein [Myxococcaceae bacterium] diamond 183 99.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
28352724 28352724 PRJNA982106_P_NODE_12986_length_299_cov_1.022124_g12746_i0 PRJNA982106 12986 299 1.022124 3.05615076 Myxococcota bacterium 2818507 Bacteria Bacteria 48.1 8.88e-4   NR MCU0661304.1 2818507 g12746 i0 41 0.612040133779264 61 35 61.2 1 10 192 430 489 MCU0661304.1 tetratricopeptide repeat protein [Myxococcota bacterium] diamond 183 48.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28637194 28637194 PRJNA982106_P_NODE_21007_length_251_cov_0.865169_g20767_i0 PRJNA982106 21007 251 0.865169 2.17157419 Polyangia bacterium 3058050 Bacteria Bacteria 102 7.8e-24   NR HZS35889.1 3058050 g20767 i0 56.6 0.99203187250996006 83 36 99.2 0 249 1 138 220 HZS35889.1 magnesium/cobalt transporter CorA [Polyangia bacterium] diamond 249 102 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
28674636 28674636 PRJNA982106_P_NODE_31627_length_242_cov_0.911243_g31387_i0 PRJNA982106 31627 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 141 1.9e-40   NR TMQ10042.1 2026735 g31387 i0 87.5 8.92561983471074 80 10 99.2 0 1 240 10 89 TMQ10042.1 MAG: response regulator [Deltaproteobacteria bacterium] diamond 2160 141 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28826183 28826183 PRJNA982106_P_NODE_27388_length_245_cov_0.895349_g27148_i0 PRJNA982106 27388 245 0.895349 2.19360505 Labilithrix sp. 1971228 Bacteria Bacteria 155 2.27e-43   NR MBX3222223.1 1971228 g27148 i0 86.4 2.97551020408163 81 11 99.2 0 3 245 119 199 MBX3222223.1 ABC transporter substrate-binding protein [Labilithrix sp.] diamond 729 155 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
29079142 29079142 PRJNA982106_P_NODE_32368_length_241_cov_0.916667_g32128_i0 PRJNA982106 32368 241 0.916667 2.20916747 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 116 2.59e-30   NR MBM4264321.1 2026735 g32128 i0 67.5 0.995850622406639 80 26 99.6 0 1 240 91 170 MBM4264321.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 240 116 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29205476 29205476 PRJNA982106_P_NODE_17509_length_268_cov_1.579487_g17269_i0 PRJNA982106 17509 268 1.579487 4.23302516 Kofleriaceae bacterium 2212474 Bacteria Bacteria 178 1.06e-51   NR HEY8144893.1 2212474 g17269 i0 95.5 0.985074626865672 88 4 98.5 0 266 3 198 285 HEY8144893.1 oligosaccharide flippase family protein [Kofleriaceae bacterium] diamond 264 178 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
29205488 29205488 PRJNA982106_P_NODE_30869_length_242_cov_0.911243_g30629_i0 PRJNA982106 30869 242 0.911243 2.20520806 Myxococcales bacterium 2026763 Bacteria Bacteria 62.4 3.91e-9   NR HCF61210.1 2026763 g30629 i0 68.3 0.743801652892562 60 18 74.4 1 203 24 290 348 HCF61210.1 hypothetical protein [Myxococcales bacterium] diamond 180 62.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29300033 29300033 PRJNA982106_P_NODE_27289_length_245_cov_0.895349_g27049_i0 PRJNA982106 27289 245 0.895349 2.19360505 Kofleriaceae bacterium 2212474 Bacteria Bacteria 80.1 7.45e-17   NR HSN24988.1 2212474 g27049 i0 88.6 0.538775510204082 44 5 53.9 0 242 111 107 150 HSN24988.1 hypothetical protein [Kofleriaceae bacterium] diamond 132 80.1 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
29710126 29710126 PRJNA982106_P_NODE_26770_length_246_cov_0.890173_g26530_i0 PRJNA982106 26770 246 0.890173 2.18982558 Kofleriaceae bacterium 2212474 Bacteria Bacteria 101 7.059999999999999e-23   NR HEU4726501.1 2212474 g26530 i0 68.3 1 82 24 98.8 2 2 244 438 518 HEU4726501.1 hypothetical protein [Kofleriaceae bacterium] diamond 246 101 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
31100429 31100429 PRJNA982106_P_NODE_24195_length_248_cov_0.880000_g23955_i0 PRJNA982106 24195 248 0.88 2.1824 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 155 8.269999999999999e-45   NR MBM2804802.1 2026735 g23955 i0 92.7 5.95161290322581 82 6 99.2 0 2 247 140 221 MBM2804802.1 Ion trans 2 protein [Deltaproteobacteria bacterium] diamond 1476 155 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31131880 31131880 PRJNA982106_P_NODE_32535_length_241_cov_0.916667_g32295_i0 PRJNA982106 32535 241 0.916667 2.20916747 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 160 5.84e-44   NR MBM4257563.1 2026735 g32295 i0 100 4.9792531120332 80 0 99.6 0 1 240 298 377 MBM4257563.1 serine protein kinase [Deltaproteobacteria bacterium] diamond 1200 160 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31549527 31549527 PRJNA982106_P_NODE_31616_length_242_cov_0.911243_g31376_i0 PRJNA982106 31616 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 62.4 1.44e-9   NR HBZ70773.1 2026735 g31376 i0 78.9 2.41735537190083 38 8 47.1 0 115 2 57 94 HBZ70773.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 585 62.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31891178 31891178 PRJNA982106_P_NODE_20557_length_251_cov_0.865169_g20317_i0 PRJNA982106 20557 251 0.865169 2.17157419 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 140 1.7999999999999998e-36   NR MBM4259945.1 2026735 g20317 i0 83.1 0.99203187250996006 83 14 99.2 0 250 2 45 127 MBM4259945.1 transcription-repair coupling factor [Deltaproteobacteria bacterium] diamond 249 140 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32239514 32239514 PRJNA982106_P_NODE_24178_length_248_cov_0.880000_g23938_i0 PRJNA982106 24178 248 0.88 2.1824 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 44.3 0.0112   NR MEO8180577.1 2026735 g23938 i0 41.4 0.701612903225806 58 27 61.7 2 20 172 269 326 MEO8180577.1 glycosyltransferase family 39 protein [Deltaproteobacteria bacterium] diamond 174 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32467040 32467040 PRJNA982106_P_NODE_30739_length_242_cov_0.911243_g30499_i0 PRJNA982106 30739 242 0.911243 2.20520806 Pendulispora 3375062 Bacteria Bacteria 89.7 5.96e-21   NR WP_394822232.1 2741071 g30499 i0 63.9 1.74793388429752 72 26 89.3 0 231 16 1 72 WP_394822232.1 MerR family transcriptional regulator [Pendulispora albinea] diamond 423 89.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora albinea
32681377 32681377 PRJNA982106_P_NODE_24100_length_248_cov_0.880000_g23860_i0 PRJNA982106 24100 248 0.88 2.1824 Myxococcota bacterium 2818507 Bacteria Bacteria 161 4.29e-44   NR HKA13659.1 2818507 g23860 i0 96.3 0.991935483870968 82 3 99.2 0 246 1 225 306 HKA13659.1 tetratricopeptide repeat protein [Myxococcota bacterium] diamond 246 161 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32713083 32713083 PRJNA982106_P_NODE_27540_length_245_cov_0.895349_g27300_i0 PRJNA982106 27540 245 0.895349 2.19360505 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 138 1.07e-35   NR MBV8452601.1 2026735 g27300 i0 81.5 1.98367346938776 81 15 99.2 0 1 243 238 318 MBV8452601.1 AAA family ATPase [Deltaproteobacteria bacterium] diamond 486 138 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32719141 32719141 PRJNA982106_P_NODE_21420_length_250_cov_1.525424_g21180_i0 PRJNA982106 21420 250 1.525424 3.81356 Pseudomonadati 3379134 Bacteria Bacteria 104 8.939999999999997e-24   NR WP_395843356.1 83451 g21180 i0 57.1 4.008 84 35 99.6 1 249 1 807 890 WP_395843356.1 type I polyketide synthase [Archangium violaceum] diamond 1002 104 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium violaceum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;