RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA982106" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 7 ✖

bioproject 1

  • PRJNA982106 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7341486 7341486 PRJNA982106_P_NODE_16146_length_277_cov_1.205882_g15906_i0 PRJNA982106 16146 277 1.205882 3.34029314 Deinococcus sp. 6GRE 47478 Bacteria Bacteria 165 7.829999999999998e-48   NR WP_230295000.1 2745873 g15906 i0 84.6 0.985559566787004 91 14 98.6 0 273 1 161 251 WP_230295000.1 LLM class flavin-dependent oxidoreductase [Deinococcus sp. 6GRE01] diamond 273 165 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. 6GRE01
27026285 27026285 PRJNA982106_P_NODE_28102_length_245_cov_0.895349_g27862_i0 PRJNA982106 28102 245 0.895349 2.19360505 Cloacibacillus sp. An23 1965591 Bacteria Bacteria 155 1.92e-44   NR WP_087364622.1 1965591 g27862 i0 93.8 0.991836734693878 81 5 99.2 0 1 243 211 291 WP_087364622.1 AIR synthase related protein [Cloacibacillus sp. An23] diamond 243 155 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus Cloacibacillus sp. An23
27468852 27468852 PRJNA982106_P_NODE_27683_length_245_cov_0.895349_g27443_i0 PRJNA982106 27683 245 0.895349 2.19360505 Deinococcota bacterium 1913990 Bacteria Bacteria 102 4.83e-24   NR MEY4531373.1 1913990 g27443 i0 63 0.991836734693878 81 28 99.2 1 3 245 9 87 MEY4531373.1 hypothetical protein [Deinococcota bacterium] diamond 243 102 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
28068598 28068598 PRJNA982106_P_NODE_23905_length_248_cov_0.880000_g23665_i0 PRJNA982106 23905 248 0.88 2.1824 Cloacibacillus sp. 2049023 Bacteria Bacteria 79 7.09e-15   NR MEG2185386.1 2049023 g23665 i0 62.9 1.69354838709677 70 26 84.7 0 245 36 477 546 MEG2185386.1 tape measure protein [Cloacibacillus sp.] diamond 420 79 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus Cloacibacillus sp.
28068608 28068608 PRJNA982106_P_NODE_32785_length_241_cov_0.916667_g32545_i0 PRJNA982106 32785 241 0.916667 2.20916747 uncultured Cloacibacillus sp. 889794 Bacteria Bacteria 168 1.28e-49   NR WP_303146611.1 889794 g32545 i0 100 0.983402489626556 79 0 98.3 0 239 3 91 169 WP_303146611.1 succinylglutamate desuccinylase/aspartoacylase domain-containing protein [uncultured Cloacibacillus sp.] diamond 237 168 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus uncultured Cloacibacillus sp.
30816187 30816187 PRJNA982106_P_NODE_22614_length_249_cov_1.340909_g22374_i0 PRJNA982106 22614 249 1.340909 3.33886341 Synergistaceae bacterium 2053624 Bacteria Bacteria 58.2 1.5e-7   NR HPJ26755.1 2053624 g22374 i0 38.3 0.975903614457831 81 50 97.6 0 245 3 751 831 HPJ26755.1 phage tail protein [Synergistaceae bacterium] diamond 243 58.2 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
31258594 31258594 PRJNA982106_P_NODE_20375_length_251_cov_0.865169_g20135_i0 PRJNA982106 20375 251 0.865169 2.17157419 Meiothermus sp. 1955249 Bacteria Bacteria 109 1.12e-25   NR MDX2005340.1 1955249 g20135 i0 67.5 0.956175298804781 80 24 95.6 1 241 2 200 277 MDX2005340.1 G8 domain-containing protein [Meiothermus sp.] diamond 240 109 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;