RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA982106" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 9 ✖

bioproject 1

  • PRJNA982106 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4792122 4792122 PRJNA982106_P_NODE_4_length_9164_cov_18.789792_g1_i0 PRJNA982106 4 9164 18.789792 1721.89653888 Picornaviridae sp. 1530251 Viruses Viruses 1885 0   NR WWV86902.1 1530251 g1 i0 72 0.42099519860323 1286 348 41.8 7 1801 5628 2 1285 WWV86902.1 MAG: hypothetical protein, partial [Picornaviridae sp.] diamond 3858 1885 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
26715377 26715377 PRJNA982106_P_NODE_2961_length_508_cov_1.482759_g2722_i0 PRJNA982106 2961 508 1.482759 7.53241572 Zebrafish influenza B-like virus RQ01 Viruses Viruses 291 2.4099999999999998e-95   NR AXG64379.1 RQ01 g2722 i0 87.6 6.98622047244094 169 21 99.8 0 2 508 18 186 AXG64379.1 nucleoprotein, partial [Influenza B virus] diamond 3549 291 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
28194745 28194745 PRJNA982106_P_NODE_28406_length_244_cov_0.900585_g28166_i0 PRJNA982106 28406 244 0.900585 2.1974274 Spring viraemia of carp virus 696863 Viruses Viruses 118 2.19e-29   NR NP_116744.1 696863 g28166 i0 71.6 2.98770491803279 81 23 99.6 0 2 244 222 302 NP_116744.1 nucleocapsid protein [Sprivivirus cyprinus] diamond 729 118 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sprivivirus Spring viraemia of carp virus
29205483 29205483 PRJNA982106_P_NODE_24009_length_248_cov_0.880000_g23769_i0 PRJNA982106 24009 248 0.88 2.1824 Spring viraemia of carp virus 696863 Viruses Viruses 123 1.52e-30   NR NP_116748.1 696863 g23769 i0 80.5 0.991935483870968 82 16 99.2 0 1 246 1748 1829 NP_116748.1 polymerase [Sprivivirus cyprinus] diamond 246 123 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sprivivirus Spring viraemia of carp virus
29495453 29495453 PRJNA982106_P_NODE_16850_length_272_cov_1.547739_g16610_i0 PRJNA982106 16850 272 1.547739 4.20985008 Zebrafish influenza B-like virus RQ01 Viruses Viruses 173 2.7799999999999995e-48   NR NP_056659.1 RQ01 g16610 i0 92.2 18.8602941176471 90 7 99.3 0 3 272 570 659 NP_056659.1 polymerase PA [Influenza B virus (B/Lee/1940)] diamond 5130 173 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
29552387 29552387 PRJNA982106_P_NODE_26190_length_246_cov_0.890173_g25950_i0 PRJNA982106 26190 246 0.890173 2.18982558 Spring viraemia of carp virus 696863 Viruses Viruses 102 2.86e-23   NR NP_116748.1 696863 g25950 i0 65.4 0.98780487804878 81 28 98.8 0 3 245 1828 1908 NP_116748.1 polymerase [Sprivivirus cyprinus] diamond 243 102 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sprivivirus Spring viraemia of carp virus
30184263 30184263 PRJNA982106_P_NODE_32272_length_241_cov_0.916667_g32032_i0 PRJNA982106 32272 241 0.916667 2.20916747 Spring viraemia of carp virus 696863 Viruses Viruses 118 7.6e-29   NR NP_116748.1 696863 g32032 i0 72.2 0.983402489626556 79 22 98.3 0 3 239 1825 1903 NP_116748.1 polymerase [Sprivivirus cyprinus] diamond 237 118 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sprivivirus Spring viraemia of carp virus
31131879 31131879 PRJNA982106_P_NODE_31195_length_242_cov_0.911243_g30955_i0 PRJNA982106 31195 242 0.911243 2.20520806 Spring viraemia of carp virus 696863 Viruses Viruses 118 1.4999999999999996e-29   NR NP_116744.1 696863 g30955 i0 78.2 1.93388429752066 78 17 96.7 0 2 235 3 80 NP_116744.1 nucleocapsid protein [Sprivivirus cyprinus] diamond 468 118 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sprivivirus Spring viraemia of carp virus
31638062 31638062 PRJNA982106_P_NODE_2476_length_552_cov_1.202505_g2238_i0 PRJNA982106 2476 552 1.202505 6.6378276 Zebrafish influenza B-like virus RQ01 Viruses Viruses 217 7.87e-66   NR 7XVR_A RQ01 g2238 i0 61.7 1.98913043478261 183 70 99.5 0 550 2 172 354 7XVR_A Chain A, Neuraminidase [Wuhan spiny eel influenza virus] diamond 1098 217 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza B-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;