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contig_metadata

35 rows where analysis = "diamond", bioproject = "PRJNA980839" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 35 ✖

bioproject 1

  • PRJNA980839 · 35 ✖

analysis 1

  • diamond · 35 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1270312 1270312 PRJNA980839_P_NODE_222621_length_245_cov_0.895349_g218837_i0 PRJNA980839 222621 245 0.895349 2.19360505 Microbacterium phage Triscuit 2126721 Viruses Viruses 144 7.23e-38   NR AVR56943.1 2126721 g218837 i0 79 0.991836734693878 81 17 99.2 0 244 2 245 325 AVR56943.1 DNA polymerase I [Microbacterium phage Triscuit] diamond 243 144 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Microbacterium phage Triscuit
2232141 2232141 PRJNA980839_P_NODE_11862_length_1857_cov_4.714686_g10197_i0 PRJNA980839 11862 1857 4.714686 87.55171902 Venezuelan equine encephalitis virus 11036 Viruses Viruses 1097 0   NR WOK35054.1 11036 g10197 i0 97.9 1.9967689822294 618 13 99.8 0 2 1855 1707 2324 WOK35054.1 nonstructural polyprotein precursor P1234 [Venezuelan equine encephalitis virus] diamond 3708 1097 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
7335351 7335351 PRJNA980839_P_NODE_156206_length_281_cov_4.028846_g152422_i0 PRJNA980839 156206 281 4.028846 11.32105726 Venezuelan equine encephalitis virus 11036 Viruses Viruses 188 1.71e-53   NR NP_740697.1 11036 g152422 i0 98.9 5.95729537366548 93 1 99.3 0 3 281 256 348 NP_740697.1 putative nonstructural protein nsP2 [Venezuelan equine encephalitis virus] diamond 1674 188 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
9887244 9887244 PRJNA980839_P_NODE_237288_length_241_cov_0.916667_g233504_i0 PRJNA980839 237288 241 0.916667 2.20916747 Microbacterium phage Cicada 2743916 Viruses Viruses 72.8 1.07e-13   NR QLF82728.1 2743916 g233504 i0 77.5 0.49792531120332 40 9 49.8 0 120 1 12 51 QLF82728.1 hypothetical protein SEA_CICADA_45 [Microbacterium phage Cicada] diamond 120 72.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Goodmanvirus Microbacterium phage Cicada
11160254 11160254 PRJNA980839_P_NODE_122509_length_320_cov_3.821862_g118725_i0 PRJNA980839 122509 320 3.821862 12.2299584 Venezuelan equine encephalitis virus 11036 Viruses Viruses 218 2.85e-63   NR WOK35054.1 11036 g118725 i0 100 12.890625 106 0 99.4 0 2 319 2328 2433 WOK35054.1 nonstructural polyprotein precursor P1234 [Venezuelan equine encephalitis virus] diamond 4125 218 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
11163524 11163524 PRJNA980839_P_NODE_70909_length_460_cov_3.532300_g67126_i0 PRJNA980839 70909 460 3.5323 16.24858 Alphavirus venezuelan 3426322 Viruses Viruses 293 2.21e-97   NR 2HWK_A 11037 g67126 i0 99.3 4.6304347826087 142 1 92.6 0 428 3 139 280 2HWK_A Chain A, helicase nsP2 [Venezuelan equine encephalitis virus (strain TC-83)] diamond 2130 293 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
11163663 11163663 PRJNA980839_P_NODE_77189_length_432_cov_4.362117_g73405_i0 PRJNA980839 77189 432 4.362117 18.84434544 Venezuelan equine encephalitis virus 11036 Viruses Viruses 301 4.669999999999999e-95   NR NP_740697.1 11036 g73405 i0 99.3 4 144 1 100 0 432 1 451 594 NP_740697.1 putative nonstructural protein nsP2 [Venezuelan equine encephalitis virus] diamond 1728 301 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
13713192 13713192 PRJNA980839_P_NODE_39231_length_744_cov_3.162444_g35657_i0 PRJNA980839 39231 744 3.162444 23.52858336 Venezuelan equine encephalitis virus 11036 Viruses Viruses 458 8.66e-146   NR NP_040823.1 11036 g35657 i0 96.3 2.96370967741935 245 9 98.8 0 9 743 1474 1718 NP_040823.1 non-structural polyprotein precursor P123 [Venezuelan equine encephalitis virus] diamond 2205 458 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
27089586 27089586 PRJNA980839_P_NODE_219922_length_245_cov_1.790698_g216138_i0 PRJNA980839 219922 245 1.790698 4.3872101 Caudoviricetes sp. 2832643 Viruses Viruses 107 2.7699999999999993e-28   NR XOS00960.1 2832643 g216138 i0 68.8 0.979591836734694 80 25 98 0 242 3 7 86 XOS00960.1 MAG: hypothetical protein MSP1251_54 [Caudoviricetes sp.] diamond 240 107 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27184140 27184140 PRJNA980839_P_NODE_204022_length_249_cov_1.840909_g200238_i0 PRJNA980839 204022 249 1.840909 4.58386341 Cressdnaviricota sp. 2748378 Viruses Viruses 46.6 0.0014   NR WAE42889.1 2748378 g200238 i0 40.4 0.626506024096386 52 31 62.7 0 41 196 183 234 WAE42889.1 MAG: capsid protein [Cressdnaviricota sp.] diamond 156 46.6 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
27285181 27285181 PRJNA980839_P_NODE_148523_length_288_cov_2.125581_g144739_i0 PRJNA980839 148523 288 2.125581 6.12167328 root 1 Root_unresolved Root_unresolved 110 1.17e-29   NR CAB4177875.1 2100421 g144739 i0 80 1.27083333333333 60 12 62.5 0 223 44 1 60 CAB4177875.1 hypothetical protein UFOVP1015_12 [uncultured Caudovirales phage] diamond 366 110 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
27816195 27816195 PRJNA980839_P_NODE_193424_length_253_cov_1.711111_g189640_i0 PRJNA980839 193424 253 1.711111 4.32911083 Caudoviricetes sp. 2832643 Viruses Viruses 119 5.84e-29   NR XOR63755.1 2832643 g189640 i0 72.3 0.984189723320158 83 23 98.4 0 251 3 504 586 XOR63755.1 MAG: lig protein [Caudoviricetes sp.] diamond 249 119 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27847399 27847399 PRJNA980839_P_NODE_144044_length_293_cov_1.050000_g140260_i0 PRJNA980839 144044 293 1.05 3.0765 uncultured Caudovirales phage 2100421 Viruses Viruses 80.1 8.58e-17   NR CAB4179971.1 2100421 g140260 i0 45.2 0.95221843003413 93 48 94.2 2 1 276 10 100 CAB4179971.1 hypothetical protein UFOVP1040_10 [uncultured Caudovirales phage] diamond 279 80.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
28447633 28447633 PRJNA980839_P_NODE_209046_length_248_cov_0.948571_g205262_i0 PRJNA980839 209046 248 0.948571 2.35245608 Caudoviricetes sp. 2832643 Viruses Viruses 78.6 5.29e-17   NR XOR38086.1 2832643 g205262 i0 68.4 0.689516129032258 57 17 67.7 1 81 248 1 57 XOR38086.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 171 78.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28763083 28763083 PRJNA980839_P_NODE_175467_length_266_cov_1.580311_g171683_i0 PRJNA980839 175467 266 1.580311 4.20362726 Caudoviricetes sp. 2832643 Viruses Viruses 91.7 2.71e-19   NR DAH75483.1 2832643 g171683 i0 51.8 0.958646616541353 85 38 94.7 2 261 10 118 200 DAH75483.1 MAG TPA: 4-amino-4-deoxy-L-arabinose (L-Ara4N) transferase protein [Caudoviricetes sp.] diamond 255 91.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28794592 28794592 PRJNA980839_P_NODE_218267_length_246_cov_0.890173_g214483_i0 PRJNA980839 218267 246 0.890173 2.18982558 Arthrobacter phage Mendel 2484218 Viruses Viruses 50.8 4.66e-5   NR YP_009842182.1 2484218 g214483 i0 39.3 1.02439024390244 84 49 100 2 1 246 81 164 YP_009842182.1 hypothetical protein HWB96_gp07 [Arthrobacter phage Mendel] diamond 252 50.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Anjalivirus Anjalivirus mendel
28952904 28952904 PRJNA980839_P_NODE_209908_length_248_cov_0.880000_g206124_i0 PRJNA980839 209908 248 0.88 2.1824 Kummerowia striata gokushovirus 2740155 Viruses Viruses 80.1 1.11e-15   NR QKI28940.1 2740155 g206124 i0 57.7 1.86290322580645 71 25 85.9 2 213 1 108 173 QKI28940.1 VP4 [Kummerowia striata gokushovirus] diamond 462 80.1 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Kummerowia striata gokushovirus
29331532 29331532 PRJNA980839_P_NODE_197029_length_251_cov_1.387640_g193245_i0 PRJNA980839 197029 251 1.38764 3.4829764 uncultured Caudovirales phage 2100421 Viruses Viruses 52.4 1.42e-5   NR CAB4139172.1 2100421 g193245 i0 69.7 9.82470119521912 33 10 39.4 0 99 1 138 170 CAB4139172.1 MdpB Microcystin-dependent protein [uncultured Caudovirales phage] diamond 2466 52.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
29331545 29331545 PRJNA980839_P_NODE_228249_length_243_cov_1.735294_g224465_i0 PRJNA980839 228249 243 1.735294 4.21676442 Caudoviricetes sp. 2832643 Viruses Viruses 79.3 4.8e-15   NR XOQ96263.1 2832643 g224465 i0 80.4 0.62962962962963 51 10 63 0 242 90 839 889 XOQ96263.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 153 79.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29583814 29583814 PRJNA980839_P_NODE_203410_length_250_cov_0.870056_g199626_i0 PRJNA980839 203410 250 0.870056 2.17514 Corynebacterium phage phi673 2052821 Viruses Viruses 67 1.15e-10   NR YP_009639725.1 2052821 g199626 i0 45.8 0.996 83 41 99.6 1 2 250 497 575 YP_009639725.1 putative DNA polymerase I [Corynebacterium phage phi673] diamond 249 67 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Ikedavirus Ikedavirus phi673
29615354 29615354 PRJNA980839_P_NODE_145970_length_291_cov_1.059633_g142186_i0 PRJNA980839 145970 291 1.059633 3.08353203 uncultured virus 340016 Viruses Viruses 100 9.199999999999999e-24   NR AUM61873.1 340016 g142186 i0 52.6 1 97 42 99 3 288 1 89 182 AUM61873.1 capsid [uncultured virus] diamond 291 100 1 Viruses               uncultured virus
30057692 30057692 PRJNA980839_P_NODE_140411_length_297_cov_1.267857_g136627_i0 PRJNA980839 140411 297 1.267857 3.76553529 Baboon endogenous virus strain M7 11764 Viruses Viruses 196 7.069999999999998e-56   NR YP_009109689.1 11764 g136627 i0 93.9 5.92929292929293 98 6 99 0 296 3 1123 1220 YP_009109689.1 gag-pol precursor polyprotein [Baboon endogenous virus strain M7] diamond 1761 196 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Baboon endogenous virus
30152392 30152392 PRJNA980839_P_NODE_225352_length_244_cov_0.900585_g221568_i0 PRJNA980839 225352 244 0.900585 2.1974274 Adintovirus anguilla10665 3115889 Viruses Viruses 102 1.03e-24   NR DBA49780.1 3115889 g221568 i0 68.3 0.774590163934426 63 20 77.5 0 1 189 184 246 DBA49780.1 MAG TPA_asm: Penton [Adintovirus anguilla10665] diamond 189 102 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
30721221 30721221 PRJNA980839_P_NODE_153334_length_284_cov_1.459716_g149550_i0 PRJNA980839 153334 284 1.459716 4.14559344 Erythrocytic necrosis virus 1543320 Viruses Viruses 45.1 0.00114   NR QCF47508.1 1543320 g149550 i0 65.8 0.802816901408451 38 5 40.1 1 2 115 24 53 QCF47508.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 228 45.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
30721230 30721230 PRJNA980839_P_NODE_182074_length_261_cov_1.638298_g178290_i0 PRJNA980839 182074 261 1.638298 4.27595778 Genomoviridae sp. 2202565 Viruses Viruses 95.1 1.88e-21   NR XBS25398.1 2202565 g178290 i0 51.2 1.96551724137931 86 42 98.9 0 259 2 125 210 XBS25398.1 MAG: putative capsid-associated protein, partial [Genomoviridae sp.] diamond 513 95.1 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
30753026 30753026 PRJNA980839_P_NODE_85614_length_401_cov_3.246951_g81830_i0 PRJNA980839 85614 401 3.246951 13.02027351 Venezuelan equine encephalitis virus 11036 Viruses Viruses 263 5.459999999999999e-81   NR NP_740697.1 11036 g81830 i0 100 5.97007481296758 133 0 99.5 0 401 3 136 268 NP_740697.1 putative nonstructural protein nsP2 [Venezuelan equine encephalitis virus] diamond 2394 263 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
31131829 31131829 PRJNA980839_P_NODE_210115_length_248_cov_0.880000_g206331_i0 PRJNA980839 210115 248 0.88 2.1824 uncultured Caudovirales phage 2100421 Viruses Viruses 44.7 0.00513   NR CAB4183528.1 2100421 g206331 i0 54.8 0.508064516129032 42 19 50.8 0 123 248 113 154 CAB4183528.1 Collagen triple helix repeat [uncultured Caudovirales phage] diamond 126 44.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
31200932 31200932 PRJNA980839_P_NODE_90395_length_387_cov_1.248408_g86611_i0 PRJNA980839 90395 387 1.248408 4.83133896 root 1 Root_unresolved Root_unresolved 44.7 0.0354   NR DAX13388.1 38018 g86611 i0 66.7 0.511627906976744 33 11 25.6 0 285 383 230 262 DAX13388.1 MAG TPA: hyaluronidase [Bacteriophage sp.] diamond 198 45.1 0.991130820399113 Viruses               Bacteriophage sp.
31416723 31416723 PRJNA980839_P_NODE_216456_length_246_cov_1.393064_g212672_i0 PRJNA980839 216456 246 1.393064 3.42693744 Xanthomonas phage BUDD 2961708 Viruses Viruses 107 8.899999999999999e-25   NR USV41025.1 2961708 g212672 i0 59.8 1 82 30 100 1 246 1 222 300 USV41025.1 DNA topoisomerase II large subunit [Xanthomonas phage BUDD] diamond 246 107 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Xanthomonas phage BUDD
31511779 31511779 PRJNA980839_P_NODE_203336_length_250_cov_0.870056_g199552_i0 PRJNA980839 203336 250 0.870056 2.17514 Facey's Paddock virus 159143 Viruses Viruses 43.1 0.0309   NR YP_010085067.1 159143 g199552 i0 37.9 0.792 66 38 79.2 1 37 234 128 190 YP_010085067.1 membrane glycoprotein polyprotein [Facey's Paddock virus] diamond 198 43.1 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Peribunyaviridae Orthobunyavirus Orthobunyavirus faceyense
31637987 31637987 PRJNA980839_P_NODE_177456_length_264_cov_3.685864_g173672_i0 PRJNA980839 177456 264 3.685864 9.73068096 Venezuelan equine encephalitis virus 11036 Viruses Viruses 172 1.0499999999999999e-47   NR NP_040823.1 11036 g173672 i0 97.7 2 88 2 100 0 1 264 1270 1357 NP_040823.1 non-structural polyprotein precursor P123 [Venezuelan equine encephalitis virus] diamond 528 172 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
31638020 31638020 PRJNA980839_P_NODE_31356_length_905_cov_6.012019_g28068_i0 PRJNA980839 31356 905 6.012019 54.40877195 Venezuelan equine encephalitis virus 11036 Viruses Viruses 587 8.439999999999998e-193   NR NP_040823.1 11036 g28068 i0 98.7 2.97016574585635 301 4 99.8 0 3 905 311 611 NP_040823.1 non-structural polyprotein precursor P123 [Venezuelan equine encephalitis virus] diamond 2688 587 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
31954309 31954309 PRJNA980839_P_NODE_155637_length_282_cov_1.473684_g151853_i0 PRJNA980839 155637 282 1.473684 4.15578888 Podoviridae sp. ctKoA1 2832643 Viruses Viruses 103 3.35e-23   NR QGH73247.1 2656709 g151853 i0 63 0.776595744680851 73 27 77.7 0 4 222 553 625 QGH73247.1 MAG: type I site specific restriction modification system [Podoviridae sp. ctKoA10] diamond 219 103 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Podoviridae sp. ctKoA10
32649775 32649775 PRJNA980839_P_NODE_170620_length_270_cov_1.187817_g166836_i0 PRJNA980839 170620 270 1.187817 3.2071059 Mycobacterium phage Patience 1074308 Viruses Viruses 74.3 9.47e-14   NR YP_009012187.2 1074308 g166836 i0 53.1 2.13333333333333 96 33 97.8 4 5 268 99 190 YP_009012187.2 hypothetical protein CL65_gp048 [Mycobacterium phage Patience] diamond 576 74.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Patiencevirus Patiencevirus patience
32813536 32813536 PRJNA980839_P_NODE_119960_length_324_cov_4.179283_g116176_i0 PRJNA980839 119960 324 4.179283 13.54087692 Alphavirus 11019 Viruses Viruses 213 1.66e-61   NR NP_040823.1 11036 g116176 i0 100 4.9537037037037 107 0 99.1 0 2 322 1382 1488 NP_040823.1 non-structural polyprotein precursor P123 [Venezuelan equine encephalitis virus] diamond 1605 213 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;