RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA980839" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA980839 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27184140 27184140 PRJNA980839_P_NODE_204022_length_249_cov_1.840909_g200238_i0 PRJNA980839 204022 249 1.840909 4.58386341 Cressdnaviricota sp. 2748378 Viruses Viruses 46.6 0.0014   NR WAE42889.1 2748378 g200238 i0 40.4 0.626506024096386 52 31 62.7 0 41 196 183 234 WAE42889.1 MAG: capsid protein [Cressdnaviricota sp.] diamond 156 46.6 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
30721230 30721230 PRJNA980839_P_NODE_182074_length_261_cov_1.638298_g178290_i0 PRJNA980839 182074 261 1.638298 4.27595778 Genomoviridae sp. 2202565 Viruses Viruses 95.1 1.88e-21   NR XBS25398.1 2202565 g178290 i0 51.2 1.96551724137931 86 42 98.9 0 259 2 125 210 XBS25398.1 MAG: putative capsid-associated protein, partial [Genomoviridae sp.] diamond 513 95.1 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;