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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA980839" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 11 ✖

bioproject 1

  • PRJNA980839 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2232141 2232141 PRJNA980839_P_NODE_11862_length_1857_cov_4.714686_g10197_i0 PRJNA980839 11862 1857 4.714686 87.55171902 Venezuelan equine encephalitis virus 11036 Viruses Viruses 1097 0   NR WOK35054.1 11036 g10197 i0 97.9 1.9967689822294 618 13 99.8 0 2 1855 1707 2324 WOK35054.1 nonstructural polyprotein precursor P1234 [Venezuelan equine encephalitis virus] diamond 3708 1097 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
7335351 7335351 PRJNA980839_P_NODE_156206_length_281_cov_4.028846_g152422_i0 PRJNA980839 156206 281 4.028846 11.32105726 Venezuelan equine encephalitis virus 11036 Viruses Viruses 188 1.71e-53   NR NP_740697.1 11036 g152422 i0 98.9 5.95729537366548 93 1 99.3 0 3 281 256 348 NP_740697.1 putative nonstructural protein nsP2 [Venezuelan equine encephalitis virus] diamond 1674 188 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
11160254 11160254 PRJNA980839_P_NODE_122509_length_320_cov_3.821862_g118725_i0 PRJNA980839 122509 320 3.821862 12.2299584 Venezuelan equine encephalitis virus 11036 Viruses Viruses 218 2.85e-63   NR WOK35054.1 11036 g118725 i0 100 12.890625 106 0 99.4 0 2 319 2328 2433 WOK35054.1 nonstructural polyprotein precursor P1234 [Venezuelan equine encephalitis virus] diamond 4125 218 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
11163524 11163524 PRJNA980839_P_NODE_70909_length_460_cov_3.532300_g67126_i0 PRJNA980839 70909 460 3.5323 16.24858 Alphavirus venezuelan 3426322 Viruses Viruses 293 2.21e-97   NR 2HWK_A 11037 g67126 i0 99.3 4.6304347826087 142 1 92.6 0 428 3 139 280 2HWK_A Chain A, helicase nsP2 [Venezuelan equine encephalitis virus (strain TC-83)] diamond 2130 293 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
11163663 11163663 PRJNA980839_P_NODE_77189_length_432_cov_4.362117_g73405_i0 PRJNA980839 77189 432 4.362117 18.84434544 Venezuelan equine encephalitis virus 11036 Viruses Viruses 301 4.669999999999999e-95   NR NP_740697.1 11036 g73405 i0 99.3 4 144 1 100 0 432 1 451 594 NP_740697.1 putative nonstructural protein nsP2 [Venezuelan equine encephalitis virus] diamond 1728 301 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
13713192 13713192 PRJNA980839_P_NODE_39231_length_744_cov_3.162444_g35657_i0 PRJNA980839 39231 744 3.162444 23.52858336 Venezuelan equine encephalitis virus 11036 Viruses Viruses 458 8.66e-146   NR NP_040823.1 11036 g35657 i0 96.3 2.96370967741935 245 9 98.8 0 9 743 1474 1718 NP_040823.1 non-structural polyprotein precursor P123 [Venezuelan equine encephalitis virus] diamond 2205 458 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
30753026 30753026 PRJNA980839_P_NODE_85614_length_401_cov_3.246951_g81830_i0 PRJNA980839 85614 401 3.246951 13.02027351 Venezuelan equine encephalitis virus 11036 Viruses Viruses 263 5.459999999999999e-81   NR NP_740697.1 11036 g81830 i0 100 5.97007481296758 133 0 99.5 0 401 3 136 268 NP_740697.1 putative nonstructural protein nsP2 [Venezuelan equine encephalitis virus] diamond 2394 263 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
31511779 31511779 PRJNA980839_P_NODE_203336_length_250_cov_0.870056_g199552_i0 PRJNA980839 203336 250 0.870056 2.17514 Facey's Paddock virus 159143 Viruses Viruses 43.1 0.0309   NR YP_010085067.1 159143 g199552 i0 37.9 0.792 66 38 79.2 1 37 234 128 190 YP_010085067.1 membrane glycoprotein polyprotein [Facey's Paddock virus] diamond 198 43.1 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Peribunyaviridae Orthobunyavirus Orthobunyavirus faceyense
31637987 31637987 PRJNA980839_P_NODE_177456_length_264_cov_3.685864_g173672_i0 PRJNA980839 177456 264 3.685864 9.73068096 Venezuelan equine encephalitis virus 11036 Viruses Viruses 172 1.0499999999999999e-47   NR NP_040823.1 11036 g173672 i0 97.7 2 88 2 100 0 1 264 1270 1357 NP_040823.1 non-structural polyprotein precursor P123 [Venezuelan equine encephalitis virus] diamond 528 172 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
31638020 31638020 PRJNA980839_P_NODE_31356_length_905_cov_6.012019_g28068_i0 PRJNA980839 31356 905 6.012019 54.40877195 Venezuelan equine encephalitis virus 11036 Viruses Viruses 587 8.439999999999998e-193   NR NP_040823.1 11036 g28068 i0 98.7 2.97016574585635 301 4 99.8 0 3 905 311 611 NP_040823.1 non-structural polyprotein precursor P123 [Venezuelan equine encephalitis virus] diamond 2688 587 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
32813536 32813536 PRJNA980839_P_NODE_119960_length_324_cov_4.179283_g116176_i0 PRJNA980839 119960 324 4.179283 13.54087692 Alphavirus 11019 Viruses Viruses 213 1.66e-61   NR NP_040823.1 11036 g116176 i0 100 4.9537037037037 107 0 99.1 0 2 322 1382 1488 NP_040823.1 non-structural polyprotein precursor P123 [Venezuelan equine encephalitis virus] diamond 1605 213 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;