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contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA980839" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 19 ✖

bioproject 1

  • PRJNA980839 · 19 ✖

analysis 1

  • diamond · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
958139 958139 PRJNA980839_P_NODE_186401_length_258_cov_1.664865_g182617_i0 PRJNA980839 186401 258 1.664865 4.2953517 Triparma 722752 SAR_Eukaryotes SAR_Eukaryotes 159 4.84e-47   NR GMI08560.1 1606542 g182617 i0 85.9 12.8488372093023 85 12 98.8 0 2 256 88 172 GMI08560.1 hypothetical protein TrVE_jg6717 [Triparma verrucosa] diamond 3315 159 1 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Triparma Triparma verrucosa
17535650 17535650 PRJNA980839_P_NODE_165954_length_273_cov_3.025000_g162170_i0 PRJNA980839 165954 273 3.025 8.25825 Eimeriidae 5799 SAR_Eukaryotes SAR_Eukaryotes 115 5.3e-31   NR XP_013230381.1 5802 g162170 i0 66.3 3.76923076923077 86 29 94.5 0 7 264 1 86 XP_013230381.1 60S Ribosomal protein L36, putative [Eimeria tenella] diamond 1029 115 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
26614571 26614571 PRJNA980839_P_NODE_83061_length_410_cov_2.089021_g79277_i0 PRJNA980839 83061 410 2.089021 8.5649861 Vitrella brassicaformis CCMP3155 1169540 SAR_Eukaryotes SAR_Eukaryotes 132 4.42e-37   NR CEM30526.1 1169540 g79277 i0 73.1 0.760975609756098 104 28 76.1 0 410 99 3 106 CEM30526.1 unnamed protein product [Vitrella brassicaformis CCMP3155] diamond 312 132 1 Eukaryota Sar         Vitrellaceae Vitrella Vitrella brassicaformis
26905779 26905779 PRJNA980839_P_NODE_239521_length_241_cov_0.916667_g235737_i0 PRJNA980839 239521 241 0.916667 2.20916747 root 1 Root_unresolved Root_unresolved 44.7 0.00755   NR CAE8625471.1 89957 g235737 i0 64 1.86721991701245 25 9 31.1 0 241 167 198 222 CAE8625471.1 unnamed protein product, partial [Polarella glacialis] diamond 450 45.1 0.991130820399113 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
27595107 27595107 PRJNA980839_P_NODE_203204_length_250_cov_0.870056_g199420_i0 PRJNA980839 203204 250 0.870056 2.17514 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 73.2 2.43e-13   NR CEO97863.1 37360 g199420 i0 63.9 0.732 61 22 73.2 0 186 4 26 86 CEO97863.1 hypothetical protein PBRA_005977 [Plasmodiophora brassicae] diamond 183 73.2 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
27690053 27690053 PRJNA980839_P_NODE_127844_length_313_cov_1.283333_g124060_i0 PRJNA980839 127844 313 1.283333 4.01683229 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0435   NR CAK0871804.1 89957 g124060 i0 46.9 0.469648562300319 49 26 47 0 270 124 47 95 CAK0871804.1 unnamed protein product [Polarella glacialis] diamond 147 43.5 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
28479085 28479085 PRJNA980839_P_NODE_237606_length_241_cov_0.916667_g233822_i0 PRJNA980839 237606 241 0.916667 2.20916747 Vitrella brassicaformis CCMP3155 1169540 SAR_Eukaryotes SAR_Eukaryotes 129 1.07e-35   NR CEM05395.1 1169540 g233822 i0 76 0.933609958506224 75 18 93.4 0 241 17 107 181 CEM05395.1 unnamed protein product [Vitrella brassicaformis CCMP3155] diamond 225 129 1 Eukaryota Sar         Vitrellaceae Vitrella Vitrella brassicaformis
28485141 28485141 PRJNA980839_P_NODE_225186_length_244_cov_0.900585_g221402_i0 PRJNA980839 225186 244 0.900585 2.1974274 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.2 1.36e-7   NR OMJ66985.1 5963 g221402 i0 79.4 2.92622950819672 34 7 41.8 0 239 138 298 331 OMJ66985.1 hypothetical protein SteCoe_35983 [Stentor coeruleus] diamond 714 58.5 0.994871794871795 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
28769185 28769185 PRJNA980839_P_NODE_205467_length_249_cov_0.875000_g201683_i0 PRJNA980839 205467 249 0.875 2.17875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 55.1 1.5e-6   NR CDW72625.1 5949 g201683 i0 38.3 2.67469879518072 81 48 97.6 1 245 3 185 263 CDW72625.1 UNKNOWN [Stylonychia lemnae] diamond 666 55.5 0.992792792792793 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28984501 28984501 PRJNA980839_P_NODE_232108_length_242_cov_1.822485_g228324_i0 PRJNA980839 232108 242 1.822485 4.4104137 Tribonema minus 303371 SAR_Eukaryotes SAR_Eukaryotes 119 1.73e-32   NR KAG5177524.1 303371 g228324 i0 72.7 0.954545454545455 77 21 95.5 0 2 232 3 79 KAG5177524.1 ribosomal protein L14-domain-containing protein [Tribonema minus] diamond 231 119 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema minus
29426061 29426061 PRJNA980839_P_NODE_227349_length_244_cov_0.894737_g223565_i0 PRJNA980839 227349 244 0.894737 2.18315828 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0212   NR OQR81176.1 1202772 g223565 i0 37.8 0.55327868852459 45 28 55.3 0 104 238 1714 1758 OQR81176.1 hypothetical protein ACHHYP_16695 [Achlya hypogyna] diamond 135 43.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
29552307 29552307 PRJNA980839_P_NODE_147790_length_289_cov_1.425926_g144006_i0 PRJNA980839 147790 289 1.425926 4.12092614 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 103 3.429999999999999e-23   NR GBG28221.1 2315210 g144006 i0 62.7 2.75086505190311 83 30 86.2 1 6 254 512 593 GBG28221.1 ATP synthase subunit beta, chloroplastic [Hondaea fermentalgiana] diamond 795 103 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
29994817 29994817 PRJNA980839_P_NODE_152391_length_285_cov_1.334906_g148607_i0 PRJNA980839 152391 285 1.334906 3.8044821 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 68.9 3.9e-11   NR KAJ1433988.1 483371 g148607 i0 41.4 1.04210526315789 99 53 98.9 1 3 284 213 311 KAJ1433988.1 hypothetical protein B484DRAFT_394296, partial [Ochromonadaceae sp. CCMP2298] diamond 297 68.9 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
30563060 30563060 PRJNA980839_P_NODE_195233_length_252_cov_1.659218_g191449_i0 PRJNA980839 195233 252 1.659218 4.18122936 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 68.9 1.14e-11   NR TEB19254.1 2494336 g191449 i0 62.3 0.630952380952381 53 20 63.1 0 189 31 211 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 159 68.9 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
31043704 31043704 PRJNA980839_P_NODE_153395_length_284_cov_1.459716_g149611_i0 PRJNA980839 153395 284 1.459716 4.14559344 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 62.4 8.73e-10   NR XP_003882759.1 572307 g149611 i0 59.6 1.20422535211268 57 23 60.2 0 284 114 90 146 XP_003882759.1 hypothetical protein NCLIV_025160 [Neospora caninum Liverpool] diamond 342 62.8 0.993630573248408 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
31258510 31258510 PRJNA980839_P_NODE_117095_length_329_cov_1.804688_g113311_i0 PRJNA980839 117095 329 1.804688 5.93742352 Symbiodinium natans 878477 SAR_Eukaryotes SAR_Eukaryotes 155 1.14e-45   NR CAE7558582.1 878477 g113311 i0 74 3.64741641337386 100 26 91.2 0 328 29 71 170 CAE7558582.1 rps4x [Symbiodinium natans] diamond 1200 155 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium natans
32080926 32080926 PRJNA980839_P_NODE_213198_length_247_cov_0.885057_g209414_i0 PRJNA980839 213198 247 0.885057 2.18609079 Symbiodinium sp. CCMP2456 1519616 SAR_Eukaryotes SAR_Eukaryotes 149 1.1599999999999999e-42   NR CAE7353696.1 1519616 g209414 i0 100 0.983805668016194 81 0 98.4 0 245 3 184 264 CAE7353696.1 CACNA1H, partial [Symbiodinium sp. CCMP2456] diamond 243 149 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium sp. CCMP2456
32775980 32775980 PRJNA980839_P_NODE_179680_length_263_cov_1.278947_g175896_i0 PRJNA980839 179680 263 1.278947 3.36363061 Vitrella brassicaformis CCMP3155 1169540 SAR_Eukaryotes SAR_Eukaryotes 47.8 8.33e-4   NR CEM24402.1 1169540 g175896 i0 37.9 0.992395437262357 87 48 92.4 2 19 261 982 1068 CEM24402.1 unnamed protein product [Vitrella brassicaformis CCMP3155] diamond 261 47.8 1 Eukaryota Sar         Vitrellaceae Vitrella Vitrella brassicaformis
32781918 32781918 PRJNA980839_P_NODE_231760_length_242_cov_2.414201_g227976_i0 PRJNA980839 231760 242 2.414201 5.84236642 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 71.6 2.41e-12   NR XP_067788400.1 4785 g227976 i0 49.3 7.17768595041322 73 37 90.5 0 23 241 492 564 XP_067788400.1 TKL protein kinase [Phytophthora cinnamomi] diamond 1737 71.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;