RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA980585" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA980585 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26868176 26868176 PRJNA980585_P_NODE_40361_length_251_cov_1.219101_g40107_i0 PRJNA980585 40361 251 1.219101 3.05994351 Rozella allomycis CSF55 988480 Fungi Fungi 102 1.81e-23   NR EPZ31343.1 988480 g40107 i0 53 0.99203187250996006 83 39 99.2 0 3 251 196 278 EPZ31343.1 DUF1900 domain-containing protein [Rozella allomycis CSF55] diamond 249 102 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27784537 27784537 PRJNA980585_P_NODE_27544_length_286_cov_1.666667_g27290_i0 PRJNA980585 27544 286 1.666667 4.76666762 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 88.6 3.97e-18   NR PJF16610.1 1246581 g27290 i0 50.6 0.912587412587413 87 40 88.1 1 282 31 363 449 PJF16610.1 Peptidase M16, zinc-binding site domain-containing protein, partial [Paramicrosporidium saccamoebae] diamond 261 88.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
27910387 27910387 PRJNA980585_P_NODE_61205_length_241_cov_0.916667_g60951_i0 PRJNA980585 61205 241 0.916667 2.20916747 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 67.8 5.62e-11   NR PJF17853.1 1246581 g60951 i0 68.3 0.510373443983402 41 13 51 0 123 1 994 1034 PJF17853.1 msh2 mismatch repair during meiosis [Paramicrosporidium saccamoebae] diamond 123 67.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
29142267 29142267 PRJNA980585_P_NODE_9969_length_424_cov_1.270655_g9715_i0 PRJNA980585 9969 424 1.270655 5.3875772 Rozella allomycis CSF55 988480 Fungi Fungi 57 2.34e-6   NR RKP19246.1 988480 g9715 i0 31.3 2.08018867924528 144 87 98.3 4 417 1 26 162 RKP19246.1 UV excision repair protein Rad23 [Rozella allomycis CSF55] diamond 882 57 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30215600 30215600 PRJNA980585_P_NODE_39352_length_253_cov_43.450000_g39098_i0 PRJNA980585 39352 253 43.45 109.9285 Rozella allomycis CSF55 988480 Fungi Fungi 83.6 3.06e-17   NR EPZ34692.1 988480 g39098 i0 66.2 3.72332015810277 65 21 75.9 1 25 216 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 83.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30658088 30658088 PRJNA980585_P_NODE_44693_length_249_cov_0.875000_g44439_i0 PRJNA980585 44693 249 0.875 2.17875 Rozella allomycis CSF55 988480 Fungi Fungi 57.8 2.03e-7   NR RKP18738.1 988480 g44439 i0 36.6 8.87951807228916 82 52 98.8 0 2 247 862 943 RKP18738.1 FH2-domain-containing protein, partial [Rozella allomycis CSF55] diamond 2211 57.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30721171 30721171 PRJNA980585_P_NODE_47034_length_248_cov_0.880000_g46780_i0 PRJNA980585 47034 248 0.88 2.1824 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 72 9.9e-13   NR PJF19419.1 1246581 g46780 i0 45.7 1.94758064516129 81 43 98 1 3 245 141 220 PJF19419.1 hypothetical protein PSACC_00810 [Paramicrosporidium saccamoebae] diamond 483 72 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
31637918 31637918 PRJNA980585_P_NODE_41916_length_251_cov_0.865169_g41662_i0 PRJNA980585 41916 251 0.865169 2.17157419 Rozella allomycis CSF55 988480 Fungi Fungi 50.4 3.25e-5   NR EPZ33453.1 988480 g41662 i0 41.8 1.57768924302789 67 37 80.1 1 220 20 22 86 EPZ33453.1 Retrieval of early ER protein Rer1 domain-containing protein [Rozella allomycis CSF55] diamond 396 50.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;