RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA980585" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA980585 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27500303 27500303 PRJNA980585_P_NODE_52223_length_245_cov_0.895349_g51969_i0 PRJNA980585 52223 245 0.895349 2.19360505 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 64.3 9.34e-10   NR MAJ73690.1 2026781 g51969 i0 37.5 0.979591836734694 80 50 98 0 2 241 142 221 MAJ73690.1 molecular chaperone GroEL [Candidatus Poribacteria bacterium] diamond 240 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30562983 30562983 PRJNA980585_P_NODE_48153_length_247_cov_1.770115_g47899_i0 PRJNA980585 48153 247 1.770115 4.37218405 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 57.4 2.63e-7   NR MDE0483319.1 2026781 g47899 i0 45.3 0.910931174089069 75 41 91.1 0 20 244 128 202 MDE0483319.1 ankyrin repeat domain-containing protein [Candidatus Poribacteria bacterium] diamond 225 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;